Gene : GSMUA_Achr3G08060_001 M. acuminata v1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  805
Name:  ? GSMUA_Achr3G08060_001 Secondary Identifier:  ? PAC:32291006
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata CAROTENOID-PWY Musa acuminata pathologic  
Macuminata PWY-5943 Musa acuminata pathologic  
Macuminata PWY-5947 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G08060_001 0.5kb upstream 0.5kb upstream 30037 true chr3: 5650418-5680454 Musa acuminata
GSMUA_Achr3G08060_001 0.5kb upstream 0.5kb upstream 500 false chr3: 5679955-5680454 Musa acuminata
GSMUA_Achr3G08060_001 0.5kb downstream 0.5kb downstream 30037 true chr3: 5649918-5679954 Musa acuminata
GSMUA_Achr3G08060_001 0.5kb downstream 0.5kb downstream 500 false chr3: 5649918-5650417 Musa acuminata
GSMUA_Achr3G08060_001 1.0kb upstream 1.0kb upstream 30537 true chr3: 5650418-5680954 Musa acuminata
GSMUA_Achr3G08060_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 5679955-5680954 Musa acuminata
GSMUA_Achr3G08060_001 1.0kb downstream 1.0kb downstream 30537 true chr3: 5649418-5679954 Musa acuminata
GSMUA_Achr3G08060_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 5649418-5650417 Musa acuminata
GSMUA_Achr3G08060_001 2.0kb upstream 2.0kb upstream 31537 true chr3: 5650418-5681954 Musa acuminata
GSMUA_Achr3G08060_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 5679955-5681954 Musa acuminata
GSMUA_Achr3G08060_001 2.0kb downstream 2.0kb downstream 31537 true chr3: 5648418-5679954 Musa acuminata
GSMUA_Achr3G08060_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 5648418-5650417 Musa acuminata
GSMUA_Achr3G08060_001 5.0kb upstream 5.0kb upstream 34537 true chr3: 5650418-5684954 Musa acuminata
GSMUA_Achr3G08060_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 5679955-5684954 Musa acuminata
GSMUA_Achr3G08060_001 5.0kb downstream 5.0kb downstream 34537 true chr3: 5645418-5679954 Musa acuminata
GSMUA_Achr3G08060_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 5645418-5650417 Musa acuminata
GSMUA_Achr3G08060_001 10.0kb upstream 10.0kb upstream 39537 true chr3: 5650418-5689954 Musa acuminata
GSMUA_Achr3G08060_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 5679955-5689954 Musa acuminata
GSMUA_Achr3G08060_001 10.0kb downstream 10.0kb downstream 39537 true chr3: 5640418-5679954 Musa acuminata
GSMUA_Achr3G08060_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 5640418-5650417 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain