Protein Domain : IPR006721

Type:  Family Name:  ATPase, F1 complex, epsilon subunit, mitochondrial
Description:  Transmembrane ATPases are membrane-bound enzyme complexes/ion transporters that use ATP hydrolysis to drive the transport of protons across a membrane. Some transmembrane ATPases also work in reverse, harnessing the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. There are several different types of transmembrane ATPases, which can differ in function (ATP hydrolysis and/or synthesis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include:F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts).V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic and they function as proton pumps that acidify intracellular compartments and, in some cases, transport protons across the plasma membrane []. They are also found in bacteria [].A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases, though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases [, ].P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes.E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP.F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) () are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse in bacteria, hydrolysing ATP to create a proton gradient.This family constitutes the mitochondrial ATP synthase epsilon subunit, which is distinct from the bacterial epsilon subunit (the latter being homologous to the mitochondrial delta subunit, ). The mitochondrial epsilon subunit is located in the stalk region of the F1 complex, and acts as an inhibitor of the ATPase catalytic core. The epsilon subunit can assume two conformations, contracted and extended, where the latter inhibits ATP hydrolysis. The conformation of the epsilon subunit is determined by the direction of rotation of the gamma subunit, and possibly by the presence of ADP. The extended epsilon subunit is thought to become extended in the presence of ADP, thereby acting as a safety lock to prevent wasteful ATP hydrolysis []. Short Name:  ATPase_F1-cplx_esu_mt

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF04627
G3DSA:1.10.1620.20
SSF48690

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0046933 IPR006721
GO:0046961 IPR006721
GO:0015986 IPR006721
GO:0000275 IPR006721

4 Ontology Annotations

GO Term Gene Name
GO:0046933 IPR006721
GO:0046961 IPR006721
GO:0015986 IPR006721
GO:0000275 IPR006721

0 Parent Features

527 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29765 D8R320 PAC:15413222 Selaginella moellendorffii 57  
evm.model.supercontig_1009.1 PAC:16404762 Carica papaya 62  
30136.m001017 B9RU09 PAC:16819145 Ricinus communis 70  
Cucsa.135130.1 PAC:16962872 Cucumis sativus 36  
Cucsa.359670.1 A0A0A0K7J6 PAC:16980622 Cucumis sativus 70  
orange1.1g035233m A0A067E3V1 PAC:18108549 Citrus sinensis 70  
AT1G51650.1 Q96253 PAC:19655200 Arabidopsis thaliana 70  
Thhalv10022333m V4LB32 PAC:20182914 Eutrema salsugineum 58  
Thhalv10011901m V4MG44 PAC:20185169 Eutrema salsugineum 82  
Thhalv10011921m V4KGI6 PAC:20185170 Eutrema salsugineum 70  
Thhalv10011919m V4KGI6 PAC:20185171 Eutrema salsugineum 70  
Ciclev10026787m V4SUW8 PAC:20802134 Citrus clementina 118  
Lus10041559 PAC:23146804 Linum usitatissimum 228  
Lus10035755 PAC:23147498 Linum usitatissimum 81  
Lus10034841 PAC:23142306 Linum usitatissimum 117  
Potri.008G056100.1 B9HMI1 PAC:27040008 Populus trichocarpa 306  
Potri.008G008900.1 PAC:27039225 Populus trichocarpa 91  
Potri.010G250000.2 A9PDH8 PAC:26980016 Populus trichocarpa 70  
Potri.010G250000.1 A9PDH8 PAC:26980017 Populus trichocarpa 70  
Gorai.008G000800.1 A0A0D2SXP4 PAC:26819110 Gossypium raimondii 70  
Gorai.007G063900.1 A0A0D2QMF8 PAC:26783650 Gossypium raimondii 70  
65925 I0YYI8 PAC:27386566 Coccomyxa subellipsoidea C-169 78  
57573 C1MR93 PAC:27346288 Micromonas pusilla CCMP1545 119  
56200 C1E0G0 PAC:27396905 Micromonas sp RCC299 74  
32630 A4S063 PAC:27414091 Ostreococcus lucimarinus 71  
Thecc1EG046972t1 A0A061DIK9 PAC:27435307 Theobroma cacao 70  
Thecc1EG046972t2 A0A061DIS4 PAC:27435308 Theobroma cacao 64  
Migut.I01175.1.p A0A022PZK6 PAC:28930795 Mimulus guttatus 69  
Araha.2389s0016.1.p PAC:28839731 Arabidopsis halleri 70  
Glyma.07G003700.1.p C6SXM9 PAC:30493453 Glycine max 70  

8 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11309608
            15473999
            15078220
            9741106
            16154570
            20450191
            18937357
            1385979