Protein Domain : IPR010729

Type:  Family Name:  Ribosomal protein L47, mitochondrial
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].This entry represents the N-terminal region (approximately 8 residues) of the eukaryotic mitochondrial 39-S ribosomal protein L47 (MRP-L47). Mitochondrial ribosomal proteins (MRPs) are the counterparts of the cytoplasmic ribosomal proteins, in that they fulfil similar functions in protein biosynthesis. However, they are distinct in number, features and primary structure []. Short Name:  Ribosomal_L47_mit

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PTHR21183
PF06984

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003735 IPR010729
GO:0006412 IPR010729
GO:0005761 IPR010729

3 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR010729
GO:0006412 IPR010729
GO:0005761 IPR010729

0 Parent Features

450 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
118813 D8SJY0 PAC:15411583 Selaginella moellendorffii 88  
evm.model.supercontig_110.33 PAC:16405797 Carica papaya 143  
evm.model.supercontig_170.28 PAC:16410847 Carica papaya 216  
30147.m013992 B9RB67 PAC:16820007 Ricinus communis 163  
Cucsa.197100.1 PAC:16968368 Cucumis sativus 158  
Cucsa.197100.2 A0A0A0LS48 PAC:16968369 Cucumis sativus 143  
Cucsa.197100.3 A0A0A0LS48 PAC:16968370 Cucumis sativus 143  
orange1.1g032302m A0A067G241 PAC:18132479 Citrus sinensis 143  
AT1G07830.1 Q94JQ7 PAC:19652895 Arabidopsis thaliana 144  
Thhalv10014955m V4LMM1 PAC:20205032 Eutrema salsugineum 145  
Thhalv10009035m V4KXR5 PAC:20185262 Eutrema salsugineum 144  
Ciclev10022742m V4SYJ2 PAC:20808346 Citrus clementina 143  
Lus10032334 PAC:23168583 Linum usitatissimum 173  
Lus10024720 PAC:23161522 Linum usitatissimum 141  
Potri.002G185800.3 B9GRW6 PAC:27021428 Populus trichocarpa 144  
Potri.002G185800.1 B9GRW6 PAC:27021427 Populus trichocarpa 144  
Potri.002G185800.4 B9GRW6 PAC:27021430 Populus trichocarpa 144  
Potri.002G185800.2 B9GRW6 PAC:27021429 Populus trichocarpa 144  
Potri.014G111100.1 A9PBH0 PAC:27034494 Populus trichocarpa 142  
Potri.014G111100.2 PAC:27034495 Populus trichocarpa 121  
Gorai.008G297400.1 A0A0D2T8Q2 PAC:26818096 Gossypium raimondii 145  
41858 I0YZ73 PAC:27386705 Coccomyxa subellipsoidea C-169 134  
154027 C1MQT0 PAC:27346343 Micromonas pusilla CCMP1545 154  
59970 C1EA71 PAC:27404373 Micromonas sp RCC299 256  
9236 A4RWZ5 PAC:27416672 Ostreococcus lucimarinus 96  
Thecc1EG012001t1 A0A061FUT6 PAC:27446653 Theobroma cacao 139  
Migut.D01783.1.p A0A022QQV7 PAC:28927774 Mimulus guttatus 141  
Migut.D01783.2.p A0A022QQV7 PAC:28927775 Mimulus guttatus 141  
Migut.D01783.3.p A0A022QQV7 PAC:28927776 Mimulus guttatus 141  
Araha.12146s0014.1.p PAC:28848575 Arabidopsis halleri 133  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498
            9445368