Protein Domain : IPR003656

Type:  Domain Name:  Zinc finger, BED-type
Description:  The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposasesfrom plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conservedaromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able tobind DNA, it has been suggested that DNA-binding is the general function of this domain [].Some proteins known to contain a BED domain are listed below:Animal, fungal and plant AC1 and Hobo-like transposases.Caenorhabditis elegans protein dpy-20, a predicted cuticular-gene transcriptional regulator.Drosophila BEAF (boundary element-associated factor), which is thought to be involved in chromatin insulation.Drosophila DREF, a transcriptional regulator for S-phase genes.Tobacco 3AF1 and tomato E4/E8-BP1, which are light- and ethylene-regulated DNA binding proteins that contain two BED fingers [, ]. Short Name:  Znf_BED

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF02892
PS50808
SM00614

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0003677 IPR003656

1 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR003656

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
233860 D8SF68 PAC:15403313 Selaginella moellendorffii 291  
evm.model.supercontig_1.434 PAC:16404382 Carica papaya 384  
evm.model.supercontig_29.102 PAC:16416125 Carica papaya 674  
evm.model.supercontig_3.39 PAC:16416690 Carica papaya 360  
evm.model.supercontig_30.114 PAC:16416905 Carica papaya 379  
evm.model.supercontig_519.2 PAC:16421947 Carica papaya 894  
29777.m000277 B9SWK8 PAC:16808337 Ricinus communis 698  
29889.m003394 B9S003 PAC:16812340 Ricinus communis 906  
29994.m000464 B9SQ89 PAC:16815381 Ricinus communis 290  
30106.m000661 B9S4Y0 PAC:16817805 Ricinus communis 854  
30143.m001167 B9SDY5 PAC:16819488 Ricinus communis 753  
30169.m006547 B9RIN3 PAC:16821347 Ricinus communis 688  
30190.m011006 B9RBQ7 PAC:16823368 Ricinus communis 670  
30226.m002048 B9REN7 PAC:16824291 Ricinus communis 739  
Cucsa.048660.1 A0A0A0KII1 PAC:16953898 Cucumis sativus 372  
Cucsa.048660.2 PAC:16953899 Cucumis sativus 355  
Cucsa.048660.4 PAC:16953901 Cucumis sativus 354  
Cucsa.090680.2 PAC:16957334 Cucumis sativus 683  
Cucsa.090680.3 PAC:16957335 Cucumis sativus 664  
Cucsa.090680.5 PAC:16957337 Cucumis sativus 664  
Cucsa.096030.1 PAC:16957974 Cucumis sativus 670  
Cucsa.090680.1 PAC:16957333 Cucumis sativus 683  
Cucsa.090680.4 PAC:16957336 Cucumis sativus 664  
Cucsa.151310.1 PAC:16964444 Cucumis sativus 415  
Cucsa.185330.1 PAC:16967680 Cucumis sativus 674  
Cucsa.036140.1 PAC:16952669 Cucumis sativus 800  
Cucsa.057910.1 PAC:16954592 Cucumis sativus 703  
Cucsa.057910.2 PAC:16954593 Cucumis sativus 703  
Cucsa.252180.1 PAC:16971912 Cucumis sativus 900  
Cucsa.312740.1 PAC:16976900 Cucumis sativus 747  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10973053
            2152132
            9225464