Protein Domain : IPR019404

Type:  Family Name:  Mediator complex, subunit Med11
Description:  The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP.This entry represents subunit Med11 of the Mediator complex []. Short Name:  Mediator_Med11

0 Child Features

0 Contains

1 Cross References

Identifier
PF10280

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0001104 IPR019404
GO:0006357 IPR019404
GO:0016592 IPR019404

3 Ontology Annotations

GO Term Gene Name
GO:0001104 IPR019404
GO:0006357 IPR019404
GO:0016592 IPR019404

0 Parent Features

421 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
111765 D8S989 PAC:15412767 Selaginella moellendorffii 119  
evm.model.supercontig_152.66 PAC:16409653 Carica papaya 115  
29842.m003514 B9RXD4 PAC:16810647 Ricinus communis 117  
Cucsa.059120.1 PAC:16954775 Cucumis sativus 118  
orange1.1g033626m A0A067GSU8 PAC:18112647 Citrus sinensis 115  
AT3G01435.1 Q6ID77 PAC:19663661 Arabidopsis thaliana 115  
Thhalv10022916m V4NV57 PAC:20201950 Eutrema salsugineum 115  
Thhalv10022365m V4NTB2 PAC:20183677 Eutrema salsugineum 185  
Ciclev10017234m V4UFU9 PAC:20814952 Citrus clementina 115  
Ciclev10017230m V4UFU9 PAC:20814951 Citrus clementina 115  
Lus10022634 PAC:23178622 Linum usitatissimum 129  
Lus10003331 PAC:23148036 Linum usitatissimum 127  
Potri.004G001600.1 A0A2K2AMX6 PAC:26989350 Populus trichocarpa 129  
Gorai.010G185800.1 A0A0D2R9Y6 PAC:26757225 Gossypium raimondii 115  
Thecc1EG044670t1 A0A061FXJ7 PAC:27441981 Theobroma cacao 117  
Thecc1EG044665t1 A0A061FQD7 PAC:27442617 Theobroma cacao 305  
Thecc1EG030340t1 A0A061GG64 PAC:27440743 Theobroma cacao 121  
Migut.H01600.1.p A0A022R2N4 PAC:28952959 Mimulus guttatus 115  
Araha.15719s0010.1.p PAC:28853443 Arabidopsis halleri 115  
Cagra.1561s0010.1.p PAC:28907462 Capsella grandiflora 115  
Glyma.03G168300.1.p I1JP91 PAC:30517051 Glycine max 115  
Glyma.19G169600.2.p C6SYN4 PAC:30515138 Glycine max 115  
Glyma.19G169600.1.p C6SYN4 PAC:30515140 Glycine max 115  
Glyma.19G169600.3.p C6SYN4 PAC:30515139 Glycine max 115  
Glyma.19G169600.5.p I1N9W7 PAC:30515142 Glycine max 111  
Glyma.19G169600.4.p I1N9W6 PAC:30515141 Glycine max 112  
Brara.A03937.1.p A0A398B0D5 PAC:30637641 Brassica rapa FPsc 115  
Brara.E03654.1.p A0A397ZNU9 PAC:30627169 Brassica rapa FPsc 115  
Bostr.25004s0002.1.p PAC:30670918 Boechera stricta 84  
Medtr1g023330.1 G7I5W9 PAC:31096956 Medicago truncatula 115  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12584197