Gene : Eucgr.L02365 E. grandis v2.0
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  1
Name:  ? Eucgr.L02365 Secondary Identifier:  ? PAC:32052338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6129 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02365 0.5kb upstream 0.5kb upstream 12473 true scaffold_827: 434-12906 Eucalyptus grandis
Eucgr.L02365 0.5kb upstream 0.5kb upstream 500 false scaffold_827: 12407-12906 Eucalyptus grandis
Eucgr.L02365 0.5kb downstream 0.5kb downstream 12406 true scaffold_827: 1-12406 Eucalyptus grandis
Eucgr.L02365 0.5kb downstream 0.5kb downstream 433 false scaffold_827: 1-433 Eucalyptus grandis
Eucgr.L02365 1.0kb upstream 1.0kb upstream 12973 true scaffold_827: 434-13406 Eucalyptus grandis
Eucgr.L02365 1.0kb upstream 1.0kb upstream 1000 false scaffold_827: 12407-13406 Eucalyptus grandis
Eucgr.L02365 1.0kb downstream 1.0kb downstream 12406 true scaffold_827: 1-12406 Eucalyptus grandis
Eucgr.L02365 1.0kb downstream 1.0kb downstream 433 false scaffold_827: 1-433 Eucalyptus grandis
Eucgr.L02365 2.0kb upstream 2.0kb upstream 13973 true scaffold_827: 434-14406 Eucalyptus grandis
Eucgr.L02365 2.0kb upstream 2.0kb upstream 2000 false scaffold_827: 12407-14406 Eucalyptus grandis
Eucgr.L02365 2.0kb downstream 2.0kb downstream 12406 true scaffold_827: 1-12406 Eucalyptus grandis
Eucgr.L02365 2.0kb downstream 2.0kb downstream 433 false scaffold_827: 1-433 Eucalyptus grandis
Eucgr.L02365 5.0kb upstream 5.0kb upstream 15782 true scaffold_827: 434-16215 Eucalyptus grandis
Eucgr.L02365 5.0kb upstream 5.0kb upstream 3809 false scaffold_827: 12407-16215 Eucalyptus grandis
Eucgr.L02365 5.0kb downstream 5.0kb downstream 12406 true scaffold_827: 1-12406 Eucalyptus grandis
Eucgr.L02365 5.0kb downstream 5.0kb downstream 433 false scaffold_827: 1-433 Eucalyptus grandis
Eucgr.L02365 10.0kb upstream 10.0kb upstream 15782 true scaffold_827: 434-16215 Eucalyptus grandis
Eucgr.L02365 10.0kb upstream 10.0kb upstream 3809 false scaffold_827: 12407-16215 Eucalyptus grandis
Eucgr.L02365 10.0kb downstream 10.0kb downstream 12406 true scaffold_827: 1-12406 Eucalyptus grandis
Eucgr.L02365 10.0kb downstream 10.0kb downstream 433 false scaffold_827: 1-433 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4624 0.0 31.2975    
cufflinks 8.41914 0.0 24.7166   Low
cufflinks 31.1541 0.0 79.4553    
cufflinks 29.4717 0.0 84.7156    
cufflinks 38.6989 0.0 98.1643 High High
cufflinks 11.4399 0.0 35.9577    

0 Strain