Gene : Eucgr.L03170 E. grandis v2.0
Defline:  (1 of 8) PTHR12612:SF10 - NUCLEAR TRANSPORT FACTOR 2-LIKE PROTEIN Genomic Order:  2
Name:  ? Eucgr.L03170 Secondary Identifier:  ? PAC:32065788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03170 0.5kb upstream 0.5kb upstream 1553 true scaffold_2183: 3073-4625 Eucalyptus grandis
Eucgr.L03170 0.5kb upstream 0.5kb upstream 500 false scaffold_2183: 4126-4625 Eucalyptus grandis
Eucgr.L03170 0.5kb downstream 0.5kb downstream 1553 true scaffold_2183: 2573-4125 Eucalyptus grandis
Eucgr.L03170 0.5kb downstream 0.5kb downstream 500 false scaffold_2183: 2573-3072 Eucalyptus grandis
Eucgr.L03170 1.0kb upstream 1.0kb upstream 2053 true scaffold_2183: 3073-5125 Eucalyptus grandis
Eucgr.L03170 1.0kb upstream 1.0kb upstream 1000 false scaffold_2183: 4126-5125 Eucalyptus grandis
Eucgr.L03170 1.0kb downstream 1.0kb downstream 2053 true scaffold_2183: 2073-4125 Eucalyptus grandis
Eucgr.L03170 1.0kb downstream 1.0kb downstream 1000 false scaffold_2183: 2073-3072 Eucalyptus grandis
Eucgr.L03170 2.0kb upstream 2.0kb upstream 3053 true scaffold_2183: 3073-6125 Eucalyptus grandis
Eucgr.L03170 2.0kb upstream 2.0kb upstream 2000 false scaffold_2183: 4126-6125 Eucalyptus grandis
Eucgr.L03170 2.0kb downstream 2.0kb downstream 3053 true scaffold_2183: 1073-4125 Eucalyptus grandis
Eucgr.L03170 2.0kb downstream 2.0kb downstream 2000 false scaffold_2183: 1073-3072 Eucalyptus grandis
Eucgr.L03170 5.0kb upstream 5.0kb upstream 4031 true scaffold_2183: 3073-7103 Eucalyptus grandis
Eucgr.L03170 5.0kb upstream 5.0kb upstream 2978 false scaffold_2183: 4126-7103 Eucalyptus grandis
Eucgr.L03170 5.0kb downstream 5.0kb downstream 4125 true scaffold_2183: 1-4125 Eucalyptus grandis
Eucgr.L03170 5.0kb downstream 5.0kb downstream 3072 false scaffold_2183: 1-3072 Eucalyptus grandis
Eucgr.L03170 10.0kb upstream 10.0kb upstream 4031 true scaffold_2183: 3073-7103 Eucalyptus grandis
Eucgr.L03170 10.0kb upstream 10.0kb upstream 2978 false scaffold_2183: 4126-7103 Eucalyptus grandis
Eucgr.L03170 10.0kb downstream 10.0kb downstream 4125 true scaffold_2183: 1-4125 Eucalyptus grandis
Eucgr.L03170 10.0kb downstream 10.0kb downstream 3072 false scaffold_2183: 1-3072 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.45786 0.0 6.9903    
cufflinks 28.4507 0.0 64.6213    
cufflinks 2.33209 0.0 6.72721    
cufflinks 34.6761 0.0 78.0363    
cufflinks 42.8349 0.0 95.377 High High
cufflinks 2.0836 0.0 5.98436    

0 Strain