Gene : Eucgr.K01749 E. grandis v2.0
Defline:  (1 of 4) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  1486
Name:  ? Eucgr.K01749 Secondary Identifier:  ? PAC:32068440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01749 0.5kb upstream 0.5kb upstream 18749 true Chr11: 22606512-22625260 Eucalyptus grandis
Eucgr.K01749 0.5kb upstream 0.5kb upstream 500 false Chr11: 22624761-22625260 Eucalyptus grandis
Eucgr.K01749 0.5kb downstream 0.5kb downstream 18749 true Chr11: 22606012-22624760 Eucalyptus grandis
Eucgr.K01749 0.5kb downstream 0.5kb downstream 500 false Chr11: 22606012-22606511 Eucalyptus grandis
Eucgr.K01749 1.0kb upstream 1.0kb upstream 19249 true Chr11: 22606512-22625760 Eucalyptus grandis
Eucgr.K01749 1.0kb upstream 1.0kb upstream 1000 false Chr11: 22624761-22625760 Eucalyptus grandis
Eucgr.K01749 1.0kb downstream 1.0kb downstream 19249 true Chr11: 22605512-22624760 Eucalyptus grandis
Eucgr.K01749 1.0kb downstream 1.0kb downstream 1000 false Chr11: 22605512-22606511 Eucalyptus grandis
Eucgr.K01749 2.0kb upstream 2.0kb upstream 20249 true Chr11: 22606512-22626760 Eucalyptus grandis
Eucgr.K01749 2.0kb upstream 2.0kb upstream 2000 false Chr11: 22624761-22626760 Eucalyptus grandis
Eucgr.K01749 2.0kb downstream 2.0kb downstream 20249 true Chr11: 22604512-22624760 Eucalyptus grandis
Eucgr.K01749 2.0kb downstream 2.0kb downstream 2000 false Chr11: 22604512-22606511 Eucalyptus grandis
Eucgr.K01749 5.0kb upstream 5.0kb upstream 23249 true Chr11: 22606512-22629760 Eucalyptus grandis
Eucgr.K01749 5.0kb upstream 5.0kb upstream 5000 false Chr11: 22624761-22629760 Eucalyptus grandis
Eucgr.K01749 5.0kb downstream 5.0kb downstream 23249 true Chr11: 22601512-22624760 Eucalyptus grandis
Eucgr.K01749 5.0kb downstream 5.0kb downstream 5000 false Chr11: 22601512-22606511 Eucalyptus grandis
Eucgr.K01749 10.0kb upstream 10.0kb upstream 28249 true Chr11: 22606512-22634760 Eucalyptus grandis
Eucgr.K01749 10.0kb upstream 10.0kb upstream 10000 false Chr11: 22624761-22634760 Eucalyptus grandis
Eucgr.K01749 10.0kb downstream 10.0kb downstream 28249 true Chr11: 22596512-22624760 Eucalyptus grandis
Eucgr.K01749 10.0kb downstream 10.0kb downstream 10000 false Chr11: 22596512-22606511 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8289 0.0 47.5209    
cufflinks 37.1815 0.0 92.66    
cufflinks 17.0139 0.0 44.9184    
cufflinks 57.1505 0.0 155.177 High High
cufflinks 25.3622 0.0 65.5262    
cufflinks 15.0433 0.0 34.1091   Low

0 Strain