Gene : Eucgr.K01291 E. grandis v2.0
Defline:  (1 of 1) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  1078
Name:  ? Eucgr.K01291 Secondary Identifier:  ? PAC:32067027
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis COA-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01291 0.5kb upstream 0.5kb upstream 1429 true Chr11: 16351511-16352939 Eucalyptus grandis
Eucgr.K01291 0.5kb upstream 0.5kb upstream 500 false Chr11: 16352440-16352939 Eucalyptus grandis
Eucgr.K01291 0.5kb downstream 0.5kb downstream 1429 true Chr11: 16351011-16352439 Eucalyptus grandis
Eucgr.K01291 0.5kb downstream 0.5kb downstream 500 false Chr11: 16351011-16351510 Eucalyptus grandis
Eucgr.K01291 1.0kb upstream 1.0kb upstream 1929 true Chr11: 16351511-16353439 Eucalyptus grandis
Eucgr.K01291 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16352440-16353439 Eucalyptus grandis
Eucgr.K01291 1.0kb downstream 1.0kb downstream 1929 true Chr11: 16350511-16352439 Eucalyptus grandis
Eucgr.K01291 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16350511-16351510 Eucalyptus grandis
Eucgr.K01291 2.0kb upstream 2.0kb upstream 2929 true Chr11: 16351511-16354439 Eucalyptus grandis
Eucgr.K01291 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16352440-16354439 Eucalyptus grandis
Eucgr.K01291 2.0kb downstream 2.0kb downstream 2929 true Chr11: 16349511-16352439 Eucalyptus grandis
Eucgr.K01291 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16349511-16351510 Eucalyptus grandis
Eucgr.K01291 5.0kb upstream 5.0kb upstream 5929 true Chr11: 16351511-16357439 Eucalyptus grandis
Eucgr.K01291 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16352440-16357439 Eucalyptus grandis
Eucgr.K01291 5.0kb downstream 5.0kb downstream 5929 true Chr11: 16346511-16352439 Eucalyptus grandis
Eucgr.K01291 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16346511-16351510 Eucalyptus grandis
Eucgr.K01291 10.0kb upstream 10.0kb upstream 10929 true Chr11: 16351511-16362439 Eucalyptus grandis
Eucgr.K01291 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16352440-16362439 Eucalyptus grandis
Eucgr.K01291 10.0kb downstream 10.0kb downstream 10929 true Chr11: 16341511-16352439 Eucalyptus grandis
Eucgr.K01291 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16341511-16351510 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3844 0.0 57.1892   High
cufflinks 4.40787 0.0 12.1213   Low
cufflinks 24.1086 0.0 56.4798   High
cufflinks 6.23029 0.0 16.5867    
cufflinks 13.4339 0.0 33.2202    
cufflinks 11.0858 0.0 28.1235    

0 Strain