Gene : Eucgr.J01185 E. grandis v2.0
Defline:  (1 of 1) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  1046
Name:  ? Eucgr.J01185 Secondary Identifier:  ? PAC:32033272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01185 0.5kb upstream 0.5kb upstream 7729 true Chr10: 12959989-12967717 Eucalyptus grandis
Eucgr.J01185 0.5kb upstream 0.5kb upstream 500 false Chr10: 12967218-12967717 Eucalyptus grandis
Eucgr.J01185 0.5kb downstream 0.5kb downstream 7729 true Chr10: 12959489-12967217 Eucalyptus grandis
Eucgr.J01185 0.5kb downstream 0.5kb downstream 500 false Chr10: 12959489-12959988 Eucalyptus grandis
Eucgr.J01185 1.0kb upstream 1.0kb upstream 8229 true Chr10: 12959989-12968217 Eucalyptus grandis
Eucgr.J01185 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12967218-12968217 Eucalyptus grandis
Eucgr.J01185 1.0kb downstream 1.0kb downstream 8229 true Chr10: 12958989-12967217 Eucalyptus grandis
Eucgr.J01185 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12958989-12959988 Eucalyptus grandis
Eucgr.J01185 2.0kb upstream 2.0kb upstream 9229 true Chr10: 12959989-12969217 Eucalyptus grandis
Eucgr.J01185 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12967218-12969217 Eucalyptus grandis
Eucgr.J01185 2.0kb downstream 2.0kb downstream 9229 true Chr10: 12957989-12967217 Eucalyptus grandis
Eucgr.J01185 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12957989-12959988 Eucalyptus grandis
Eucgr.J01185 5.0kb upstream 5.0kb upstream 12229 true Chr10: 12959989-12972217 Eucalyptus grandis
Eucgr.J01185 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12967218-12972217 Eucalyptus grandis
Eucgr.J01185 5.0kb downstream 5.0kb downstream 12229 true Chr10: 12954989-12967217 Eucalyptus grandis
Eucgr.J01185 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12954989-12959988 Eucalyptus grandis
Eucgr.J01185 10.0kb upstream 10.0kb upstream 17229 true Chr10: 12959989-12977217 Eucalyptus grandis
Eucgr.J01185 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12967218-12977217 Eucalyptus grandis
Eucgr.J01185 10.0kb downstream 10.0kb downstream 17229 true Chr10: 12949989-12967217 Eucalyptus grandis
Eucgr.J01185 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12949989-12959988 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067561 5270 Rosid View MSA
123738895 5271 Pentapetalae View MSA
122788096 5272 Eudicot View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4344 0.0 23.0961    
cufflinks 7.90438 0.0 17.5738    
cufflinks 10.8001 0.0 23.8933    
cufflinks 12.0238 0.0 26.5904   High
cufflinks 5.1959 0.0 11.7618   Low
cufflinks 7.38087 0.0 16.4665    

0 Strain