Gene : Eucgr.J00594 E. grandis v2.0
Defline:  (1 of 1) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN Genomic Order:  518
Name:  ? Eucgr.J00594 Secondary Identifier:  ? PAC:32032822
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00594 0.5kb upstream 0.5kb upstream 4905 true Chr10: 6655519-6660423 Eucalyptus grandis
Eucgr.J00594 0.5kb upstream 0.5kb upstream 500 false Chr10: 6659924-6660423 Eucalyptus grandis
Eucgr.J00594 0.5kb downstream 0.5kb downstream 4905 true Chr10: 6655019-6659923 Eucalyptus grandis
Eucgr.J00594 0.5kb downstream 0.5kb downstream 500 false Chr10: 6655019-6655518 Eucalyptus grandis
Eucgr.J00594 1.0kb upstream 1.0kb upstream 5405 true Chr10: 6655519-6660923 Eucalyptus grandis
Eucgr.J00594 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6659924-6660923 Eucalyptus grandis
Eucgr.J00594 1.0kb downstream 1.0kb downstream 5405 true Chr10: 6654519-6659923 Eucalyptus grandis
Eucgr.J00594 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6654519-6655518 Eucalyptus grandis
Eucgr.J00594 2.0kb upstream 2.0kb upstream 6405 true Chr10: 6655519-6661923 Eucalyptus grandis
Eucgr.J00594 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6659924-6661923 Eucalyptus grandis
Eucgr.J00594 2.0kb downstream 2.0kb downstream 6405 true Chr10: 6653519-6659923 Eucalyptus grandis
Eucgr.J00594 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6653519-6655518 Eucalyptus grandis
Eucgr.J00594 5.0kb upstream 5.0kb upstream 9405 true Chr10: 6655519-6664923 Eucalyptus grandis
Eucgr.J00594 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6659924-6664923 Eucalyptus grandis
Eucgr.J00594 5.0kb downstream 5.0kb downstream 9405 true Chr10: 6650519-6659923 Eucalyptus grandis
Eucgr.J00594 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6650519-6655518 Eucalyptus grandis
Eucgr.J00594 10.0kb upstream 10.0kb upstream 14405 true Chr10: 6655519-6669923 Eucalyptus grandis
Eucgr.J00594 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6659924-6669923 Eucalyptus grandis
Eucgr.J00594 10.0kb downstream 10.0kb downstream 14405 true Chr10: 6645519-6659923 Eucalyptus grandis
Eucgr.J00594 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6645519-6655518 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.6015 0.0 217.684 High High
cufflinks 43.2938 0.0 102.352 High  
cufflinks 74.8047 0.0 214.152 High  
cufflinks 34.5106 0.0 95.0374   Low
cufflinks 67.6933 0.0 188.712 High  
cufflinks 40.9434 0.0 101.417 High  

0 Strain