Gene : Eucgr.H04206 E. grandis v2.0
Defline:  (1 of 1) PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1 Genomic Order:  3182
Name:  ? Eucgr.H04206 Secondary Identifier:  ? PAC:32040877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04206 0.5kb upstream 0.5kb upstream 27860 true Chr08: 56701555-56729414 Eucalyptus grandis
Eucgr.H04206 0.5kb upstream 0.5kb upstream 500 false Chr08: 56701555-56702054 Eucalyptus grandis
Eucgr.H04206 0.5kb downstream 0.5kb downstream 27860 true Chr08: 56702055-56729914 Eucalyptus grandis
Eucgr.H04206 0.5kb downstream 0.5kb downstream 500 false Chr08: 56729415-56729914 Eucalyptus grandis
Eucgr.H04206 1.0kb upstream 1.0kb upstream 28360 true Chr08: 56701055-56729414 Eucalyptus grandis
Eucgr.H04206 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56701055-56702054 Eucalyptus grandis
Eucgr.H04206 1.0kb downstream 1.0kb downstream 28360 true Chr08: 56702055-56730414 Eucalyptus grandis
Eucgr.H04206 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56729415-56730414 Eucalyptus grandis
Eucgr.H04206 2.0kb upstream 2.0kb upstream 29360 true Chr08: 56700055-56729414 Eucalyptus grandis
Eucgr.H04206 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56700055-56702054 Eucalyptus grandis
Eucgr.H04206 2.0kb downstream 2.0kb downstream 29360 true Chr08: 56702055-56731414 Eucalyptus grandis
Eucgr.H04206 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56729415-56731414 Eucalyptus grandis
Eucgr.H04206 5.0kb upstream 5.0kb upstream 32360 true Chr08: 56697055-56729414 Eucalyptus grandis
Eucgr.H04206 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56697055-56702054 Eucalyptus grandis
Eucgr.H04206 5.0kb downstream 5.0kb downstream 32360 true Chr08: 56702055-56734414 Eucalyptus grandis
Eucgr.H04206 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56729415-56734414 Eucalyptus grandis
Eucgr.H04206 10.0kb upstream 10.0kb upstream 37360 true Chr08: 56692055-56729414 Eucalyptus grandis
Eucgr.H04206 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56692055-56702054 Eucalyptus grandis
Eucgr.H04206 10.0kb downstream 10.0kb downstream 37360 true Chr08: 56702055-56739414 Eucalyptus grandis
Eucgr.H04206 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56729415-56739414 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050351 5270 Rosid View MSA
123740065 5271 Pentapetalae View MSA
122789609 5272 Eudicot View MSA
122050896 5273 Angiosperm View MSA
121346458 5274 Embryophyte View MSA
123425740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6637 0.0 38.1991    
cufflinks 10.7138 0.0 27.1753    
cufflinks 16.1329 0.0 36.8157   High
cufflinks 10.4772 0.0 24.4633    
cufflinks 9.70192 0.0 22.4516   Low
cufflinks 15.836 0.0 41.2491    

0 Strain