Gene : Eucgr.H04456 E. grandis v2.0
Defline:  (1 of 1) PF04536 - TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase (TPM) Genomic Order:  3391
Name:  ? Eucgr.H04456 Secondary Identifier:  ? PAC:32044103
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5083 Eucalyptus grandis pathologic  
Egrandis PWY-6348 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04456 0.5kb upstream 0.5kb upstream 3351 true Chr08: 60272524-60275874 Eucalyptus grandis
Eucgr.H04456 0.5kb upstream 0.5kb upstream 500 false Chr08: 60272524-60273023 Eucalyptus grandis
Eucgr.H04456 0.5kb downstream 0.5kb downstream 3351 true Chr08: 60273024-60276374 Eucalyptus grandis
Eucgr.H04456 0.5kb downstream 0.5kb downstream 500 false Chr08: 60275875-60276374 Eucalyptus grandis
Eucgr.H04456 1.0kb upstream 1.0kb upstream 3851 true Chr08: 60272024-60275874 Eucalyptus grandis
Eucgr.H04456 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60272024-60273023 Eucalyptus grandis
Eucgr.H04456 1.0kb downstream 1.0kb downstream 3851 true Chr08: 60273024-60276874 Eucalyptus grandis
Eucgr.H04456 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60275875-60276874 Eucalyptus grandis
Eucgr.H04456 2.0kb upstream 2.0kb upstream 4851 true Chr08: 60271024-60275874 Eucalyptus grandis
Eucgr.H04456 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60271024-60273023 Eucalyptus grandis
Eucgr.H04456 2.0kb downstream 2.0kb downstream 4851 true Chr08: 60273024-60277874 Eucalyptus grandis
Eucgr.H04456 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60275875-60277874 Eucalyptus grandis
Eucgr.H04456 5.0kb upstream 5.0kb upstream 7851 true Chr08: 60268024-60275874 Eucalyptus grandis
Eucgr.H04456 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60268024-60273023 Eucalyptus grandis
Eucgr.H04456 5.0kb downstream 5.0kb downstream 7851 true Chr08: 60273024-60280874 Eucalyptus grandis
Eucgr.H04456 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60275875-60280874 Eucalyptus grandis
Eucgr.H04456 10.0kb upstream 10.0kb upstream 12851 true Chr08: 60263024-60275874 Eucalyptus grandis
Eucgr.H04456 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60263024-60273023 Eucalyptus grandis
Eucgr.H04456 10.0kb downstream 10.0kb downstream 12851 true Chr08: 60273024-60285874 Eucalyptus grandis
Eucgr.H04456 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60275875-60285874 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061871 5270 Rosid View MSA
123737495 5271 Pentapetalae View MSA
122787639 5272 Eudicot View MSA
122046154 5273 Angiosperm View MSA
121349050 5274 Embryophyte View MSA
123424307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.95296 0.0 19.8392    
cufflinks 0.361293 0.0 3.54737 Low  
cufflinks 6.26038 0.0 16.5473    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.25138 0.0 1.22018 Low Low
cufflinks 70.8762 0.0 172.228 High High

0 Strain