Gene : Eucgr.H04444 E. grandis v2.0
Defline:  (1 of 8) PTHR12612:SF10 - NUCLEAR TRANSPORT FACTOR 2-LIKE PROTEIN Genomic Order:  3379
Name:  ? Eucgr.H04444 Secondary Identifier:  ? PAC:32041011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04444 0.5kb upstream 0.5kb upstream 1399 true Chr08: 60196746-60198144 Eucalyptus grandis
Eucgr.H04444 0.5kb upstream 0.5kb upstream 500 false Chr08: 60196746-60197245 Eucalyptus grandis
Eucgr.H04444 0.5kb downstream 0.5kb downstream 1399 true Chr08: 60197246-60198644 Eucalyptus grandis
Eucgr.H04444 0.5kb downstream 0.5kb downstream 500 false Chr08: 60198145-60198644 Eucalyptus grandis
Eucgr.H04444 1.0kb upstream 1.0kb upstream 1899 true Chr08: 60196246-60198144 Eucalyptus grandis
Eucgr.H04444 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60196246-60197245 Eucalyptus grandis
Eucgr.H04444 1.0kb downstream 1.0kb downstream 1899 true Chr08: 60197246-60199144 Eucalyptus grandis
Eucgr.H04444 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60198145-60199144 Eucalyptus grandis
Eucgr.H04444 2.0kb upstream 2.0kb upstream 2899 true Chr08: 60195246-60198144 Eucalyptus grandis
Eucgr.H04444 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60195246-60197245 Eucalyptus grandis
Eucgr.H04444 2.0kb downstream 2.0kb downstream 2899 true Chr08: 60197246-60200144 Eucalyptus grandis
Eucgr.H04444 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60198145-60200144 Eucalyptus grandis
Eucgr.H04444 5.0kb upstream 5.0kb upstream 5899 true Chr08: 60192246-60198144 Eucalyptus grandis
Eucgr.H04444 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60192246-60197245 Eucalyptus grandis
Eucgr.H04444 5.0kb downstream 5.0kb downstream 5899 true Chr08: 60197246-60203144 Eucalyptus grandis
Eucgr.H04444 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60198145-60203144 Eucalyptus grandis
Eucgr.H04444 10.0kb upstream 10.0kb upstream 10899 true Chr08: 60187246-60198144 Eucalyptus grandis
Eucgr.H04444 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60187246-60197245 Eucalyptus grandis
Eucgr.H04444 10.0kb downstream 10.0kb downstream 10899 true Chr08: 60197246-60208144 Eucalyptus grandis
Eucgr.H04444 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60198145-60208144 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515805 0.0 1.79305   Low
cufflinks 7.11138 0.0 18.478    
cufflinks 0.575887 0.0 1.99143   Low
cufflinks 7.38504 0.0 19.1124    
cufflinks 6.73509 0.0 17.525    
cufflinks 1.72503 0.0 5.10018    

0 Strain