Gene : Eucgr.H04443 E. grandis v2.0
Defline:  (1 of 8) PTHR12612:SF10 - NUCLEAR TRANSPORT FACTOR 2-LIKE PROTEIN Genomic Order:  3378
Name:  ? Eucgr.H04443 Secondary Identifier:  ? PAC:32044951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04443 0.5kb upstream 0.5kb upstream 1308 true Chr08: 60192747-60194054 Eucalyptus grandis
Eucgr.H04443 0.5kb upstream 0.5kb upstream 500 false Chr08: 60192747-60193246 Eucalyptus grandis
Eucgr.H04443 0.5kb downstream 0.5kb downstream 1308 true Chr08: 60193247-60194554 Eucalyptus grandis
Eucgr.H04443 0.5kb downstream 0.5kb downstream 500 false Chr08: 60194055-60194554 Eucalyptus grandis
Eucgr.H04443 1.0kb upstream 1.0kb upstream 1808 true Chr08: 60192247-60194054 Eucalyptus grandis
Eucgr.H04443 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60192247-60193246 Eucalyptus grandis
Eucgr.H04443 1.0kb downstream 1.0kb downstream 1808 true Chr08: 60193247-60195054 Eucalyptus grandis
Eucgr.H04443 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60194055-60195054 Eucalyptus grandis
Eucgr.H04443 2.0kb upstream 2.0kb upstream 2808 true Chr08: 60191247-60194054 Eucalyptus grandis
Eucgr.H04443 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60191247-60193246 Eucalyptus grandis
Eucgr.H04443 2.0kb downstream 2.0kb downstream 2808 true Chr08: 60193247-60196054 Eucalyptus grandis
Eucgr.H04443 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60194055-60196054 Eucalyptus grandis
Eucgr.H04443 5.0kb upstream 5.0kb upstream 5808 true Chr08: 60188247-60194054 Eucalyptus grandis
Eucgr.H04443 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60188247-60193246 Eucalyptus grandis
Eucgr.H04443 5.0kb downstream 5.0kb downstream 5808 true Chr08: 60193247-60199054 Eucalyptus grandis
Eucgr.H04443 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60194055-60199054 Eucalyptus grandis
Eucgr.H04443 10.0kb upstream 10.0kb upstream 10808 true Chr08: 60183247-60194054 Eucalyptus grandis
Eucgr.H04443 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60183247-60193246 Eucalyptus grandis
Eucgr.H04443 10.0kb downstream 10.0kb downstream 10808 true Chr08: 60193247-60204054 Eucalyptus grandis
Eucgr.H04443 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60194055-60204054 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0277454 0.0 0.267303 Low Low
cufflinks 26.5868 0.0 61.4174    
cufflinks 0.61958 0.0 2.15784    
cufflinks 45.7165 0.0 102.326 High  
cufflinks 59.1062 0.0 131.143 High  
cufflinks 0.693161 0.0 2.33569 Low  

0 Strain