Gene : Eucgr.H02612 E. grandis v2.0
Defline:  (1 of 1) PTHR12606:SF28 - UBIQUITIN-LIKE-SPECIFIC PROTEASE 1C-RELATED Genomic Order:  2030
Name:  ? Eucgr.H02612 Secondary Identifier:  ? PAC:32042517
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02612 0.5kb upstream 0.5kb upstream 11737 true Chr08: 35132236-35143972 Eucalyptus grandis
Eucgr.H02612 0.5kb upstream 0.5kb upstream 500 false Chr08: 35143473-35143972 Eucalyptus grandis
Eucgr.H02612 0.5kb downstream 0.5kb downstream 11737 true Chr08: 35131736-35143472 Eucalyptus grandis
Eucgr.H02612 0.5kb downstream 0.5kb downstream 500 false Chr08: 35131736-35132235 Eucalyptus grandis
Eucgr.H02612 1.0kb upstream 1.0kb upstream 12237 true Chr08: 35132236-35144472 Eucalyptus grandis
Eucgr.H02612 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35143473-35144472 Eucalyptus grandis
Eucgr.H02612 1.0kb downstream 1.0kb downstream 12237 true Chr08: 35131236-35143472 Eucalyptus grandis
Eucgr.H02612 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35131236-35132235 Eucalyptus grandis
Eucgr.H02612 2.0kb upstream 2.0kb upstream 13237 true Chr08: 35132236-35145472 Eucalyptus grandis
Eucgr.H02612 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35143473-35145472 Eucalyptus grandis
Eucgr.H02612 2.0kb downstream 2.0kb downstream 13237 true Chr08: 35130236-35143472 Eucalyptus grandis
Eucgr.H02612 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35130236-35132235 Eucalyptus grandis
Eucgr.H02612 5.0kb upstream 5.0kb upstream 16237 true Chr08: 35132236-35148472 Eucalyptus grandis
Eucgr.H02612 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35143473-35148472 Eucalyptus grandis
Eucgr.H02612 5.0kb downstream 5.0kb downstream 16237 true Chr08: 35127236-35143472 Eucalyptus grandis
Eucgr.H02612 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35127236-35132235 Eucalyptus grandis
Eucgr.H02612 10.0kb upstream 10.0kb upstream 21237 true Chr08: 35132236-35153472 Eucalyptus grandis
Eucgr.H02612 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35143473-35153472 Eucalyptus grandis
Eucgr.H02612 10.0kb downstream 10.0kb downstream 21237 true Chr08: 35122236-35143472 Eucalyptus grandis
Eucgr.H02612 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35122236-35132235 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792436 5272 Eudicot View MSA
124050404 5270 Rosid View MSA
123747374 5271 Pentapetalae View MSA
122047902 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351646 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5003 0.0 30.3598    
cufflinks 14.1291 0.0 34.2715    
cufflinks 12.8302 0.0 39.3977    
cufflinks 6.65296 0.0 20.2397   Low
cufflinks 8.659 0.0 24.3927    
cufflinks 13.4257 0.0 37.3865    

0 Strain