Gene : Eucgr.H02024 E. grandis v2.0
Defline:  (1 of 78) PTHR11017//PTHR11017:SF162 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1457
Name:  ? Eucgr.H02024 Secondary Identifier:  ? PAC:32044691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02024 0.5kb upstream 0.5kb upstream 1849 true Chr08: 21393102-21394950 Eucalyptus grandis
Eucgr.H02024 0.5kb upstream 0.5kb upstream 500 false Chr08: 21393102-21393601 Eucalyptus grandis
Eucgr.H02024 0.5kb downstream 0.5kb downstream 1849 true Chr08: 21393602-21395450 Eucalyptus grandis
Eucgr.H02024 0.5kb downstream 0.5kb downstream 500 false Chr08: 21394951-21395450 Eucalyptus grandis
Eucgr.H02024 1.0kb upstream 1.0kb upstream 2349 true Chr08: 21392602-21394950 Eucalyptus grandis
Eucgr.H02024 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21392602-21393601 Eucalyptus grandis
Eucgr.H02024 1.0kb downstream 1.0kb downstream 2349 true Chr08: 21393602-21395950 Eucalyptus grandis
Eucgr.H02024 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21394951-21395950 Eucalyptus grandis
Eucgr.H02024 2.0kb upstream 2.0kb upstream 3349 true Chr08: 21391602-21394950 Eucalyptus grandis
Eucgr.H02024 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21391602-21393601 Eucalyptus grandis
Eucgr.H02024 2.0kb downstream 2.0kb downstream 3349 true Chr08: 21393602-21396950 Eucalyptus grandis
Eucgr.H02024 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21394951-21396950 Eucalyptus grandis
Eucgr.H02024 5.0kb upstream 5.0kb upstream 6349 true Chr08: 21388602-21394950 Eucalyptus grandis
Eucgr.H02024 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21388602-21393601 Eucalyptus grandis
Eucgr.H02024 5.0kb downstream 5.0kb downstream 6349 true Chr08: 21393602-21399950 Eucalyptus grandis
Eucgr.H02024 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21394951-21399950 Eucalyptus grandis
Eucgr.H02024 10.0kb upstream 10.0kb upstream 11349 true Chr08: 21383602-21394950 Eucalyptus grandis
Eucgr.H02024 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21383602-21393601 Eucalyptus grandis
Eucgr.H02024 10.0kb downstream 10.0kb downstream 11349 true Chr08: 21393602-21404950 Eucalyptus grandis
Eucgr.H02024 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21394951-21404950 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05333 0.0 5.89018    
cufflinks 7.5004 0.0 18.5942    
cufflinks 5.23508 0.0 13.5543    
cufflinks 8.09025 0.0 19.9181    
cufflinks 10.1377 0.0 24.6207    
cufflinks 0.947495 0.0 3.01657   Low

0 Strain