Gene : Eucgr.G02236 E. grandis v2.0
Defline:  (1 of 1) PTHR22847:SF447 - ELONGATOR COMPLEX PROTEIN 2 Genomic Order:  1793
Name:  ? Eucgr.G02236 Secondary Identifier:  ? PAC:32070101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02236 0.5kb upstream 0.5kb upstream 9481 true Chr07: 42490827-42500307 Eucalyptus grandis
Eucgr.G02236 0.5kb upstream 0.5kb upstream 500 false Chr07: 42499808-42500307 Eucalyptus grandis
Eucgr.G02236 0.5kb downstream 0.5kb downstream 9481 true Chr07: 42490327-42499807 Eucalyptus grandis
Eucgr.G02236 0.5kb downstream 0.5kb downstream 500 false Chr07: 42490327-42490826 Eucalyptus grandis
Eucgr.G02236 1.0kb upstream 1.0kb upstream 9981 true Chr07: 42490827-42500807 Eucalyptus grandis
Eucgr.G02236 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42499808-42500807 Eucalyptus grandis
Eucgr.G02236 1.0kb downstream 1.0kb downstream 9981 true Chr07: 42489827-42499807 Eucalyptus grandis
Eucgr.G02236 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42489827-42490826 Eucalyptus grandis
Eucgr.G02236 2.0kb upstream 2.0kb upstream 10981 true Chr07: 42490827-42501807 Eucalyptus grandis
Eucgr.G02236 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42499808-42501807 Eucalyptus grandis
Eucgr.G02236 2.0kb downstream 2.0kb downstream 10981 true Chr07: 42488827-42499807 Eucalyptus grandis
Eucgr.G02236 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42488827-42490826 Eucalyptus grandis
Eucgr.G02236 5.0kb upstream 5.0kb upstream 13981 true Chr07: 42490827-42504807 Eucalyptus grandis
Eucgr.G02236 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42499808-42504807 Eucalyptus grandis
Eucgr.G02236 5.0kb downstream 5.0kb downstream 13981 true Chr07: 42485827-42499807 Eucalyptus grandis
Eucgr.G02236 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42485827-42490826 Eucalyptus grandis
Eucgr.G02236 10.0kb upstream 10.0kb upstream 18981 true Chr07: 42490827-42509807 Eucalyptus grandis
Eucgr.G02236 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42499808-42509807 Eucalyptus grandis
Eucgr.G02236 10.0kb downstream 10.0kb downstream 18981 true Chr07: 42480827-42499807 Eucalyptus grandis
Eucgr.G02236 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42480827-42490826 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060702 5270 Rosid View MSA
123739790 5271 Pentapetalae View MSA
122793468 5272 Eudicot View MSA
122046472 5273 Angiosperm View MSA
121347119 5274 Embryophyte View MSA
123427316 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.60981 0.0 10.5838    
cufflinks 3.39125 0.0 7.96282   Low
cufflinks 5.6333 0.0 12.7633    
cufflinks 5.44888 0.0 12.3527    
cufflinks 5.71699 0.0 12.9414    
cufflinks 6.78639 0.0 15.2232   High

0 Strain