Gene : Eucgr.G00559 E. grandis v2.0
Defline:  (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  303
Name:  ? Eucgr.G00559 Secondary Identifier:  ? PAC:32070385
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6890 Eucalyptus grandis pathologic  
Egrandis PWY-6908 Eucalyptus grandis pathologic  
Egrandis PWY-6910 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00559 0.5kb upstream 0.5kb upstream 7107 true Chr07: 8312267-8319373 Eucalyptus grandis
Eucgr.G00559 0.5kb upstream 0.5kb upstream 500 false Chr07: 8318874-8319373 Eucalyptus grandis
Eucgr.G00559 0.5kb downstream 0.5kb downstream 7107 true Chr07: 8311767-8318873 Eucalyptus grandis
Eucgr.G00559 0.5kb downstream 0.5kb downstream 500 false Chr07: 8311767-8312266 Eucalyptus grandis
Eucgr.G00559 1.0kb upstream 1.0kb upstream 7607 true Chr07: 8312267-8319873 Eucalyptus grandis
Eucgr.G00559 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8318874-8319873 Eucalyptus grandis
Eucgr.G00559 1.0kb downstream 1.0kb downstream 7607 true Chr07: 8311267-8318873 Eucalyptus grandis
Eucgr.G00559 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8311267-8312266 Eucalyptus grandis
Eucgr.G00559 2.0kb upstream 2.0kb upstream 8607 true Chr07: 8312267-8320873 Eucalyptus grandis
Eucgr.G00559 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8318874-8320873 Eucalyptus grandis
Eucgr.G00559 2.0kb downstream 2.0kb downstream 8607 true Chr07: 8310267-8318873 Eucalyptus grandis
Eucgr.G00559 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8310267-8312266 Eucalyptus grandis
Eucgr.G00559 5.0kb upstream 5.0kb upstream 11607 true Chr07: 8312267-8323873 Eucalyptus grandis
Eucgr.G00559 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8318874-8323873 Eucalyptus grandis
Eucgr.G00559 5.0kb downstream 5.0kb downstream 11607 true Chr07: 8307267-8318873 Eucalyptus grandis
Eucgr.G00559 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8307267-8312266 Eucalyptus grandis
Eucgr.G00559 10.0kb upstream 10.0kb upstream 16607 true Chr07: 8312267-8328873 Eucalyptus grandis
Eucgr.G00559 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8318874-8328873 Eucalyptus grandis
Eucgr.G00559 10.0kb downstream 10.0kb downstream 16607 true Chr07: 8302267-8318873 Eucalyptus grandis
Eucgr.G00559 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8302267-8312266 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2149 0.0 23.234   High
cufflinks 4.70841 0.0 11.4306    
cufflinks 7.79592 0.0 18.0862    
cufflinks 6.66198 0.0 15.639    
cufflinks 4.11982 0.0 10.1289   Low
cufflinks 9.44036 0.0 21.5776    

0 Strain