Gene : Eucgr.F03434 E. grandis v2.0
Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  3054
Name:  ? Eucgr.F03434 Secondary Identifier:  ? PAC:32054717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03434 0.5kb upstream 0.5kb upstream 4152 true Chr06: 45825561-45829712 Eucalyptus grandis
Eucgr.F03434 0.5kb upstream 0.5kb upstream 500 false Chr06: 45825561-45826060 Eucalyptus grandis
Eucgr.F03434 0.5kb downstream 0.5kb downstream 4152 true Chr06: 45826061-45830212 Eucalyptus grandis
Eucgr.F03434 0.5kb downstream 0.5kb downstream 500 false Chr06: 45829713-45830212 Eucalyptus grandis
Eucgr.F03434 1.0kb upstream 1.0kb upstream 4652 true Chr06: 45825061-45829712 Eucalyptus grandis
Eucgr.F03434 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45825061-45826060 Eucalyptus grandis
Eucgr.F03434 1.0kb downstream 1.0kb downstream 4652 true Chr06: 45826061-45830712 Eucalyptus grandis
Eucgr.F03434 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45829713-45830712 Eucalyptus grandis
Eucgr.F03434 2.0kb upstream 2.0kb upstream 5652 true Chr06: 45824061-45829712 Eucalyptus grandis
Eucgr.F03434 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45824061-45826060 Eucalyptus grandis
Eucgr.F03434 2.0kb downstream 2.0kb downstream 5652 true Chr06: 45826061-45831712 Eucalyptus grandis
Eucgr.F03434 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45829713-45831712 Eucalyptus grandis
Eucgr.F03434 5.0kb upstream 5.0kb upstream 8652 true Chr06: 45821061-45829712 Eucalyptus grandis
Eucgr.F03434 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45821061-45826060 Eucalyptus grandis
Eucgr.F03434 5.0kb downstream 5.0kb downstream 8652 true Chr06: 45826061-45834712 Eucalyptus grandis
Eucgr.F03434 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45829713-45834712 Eucalyptus grandis
Eucgr.F03434 10.0kb upstream 10.0kb upstream 13652 true Chr06: 45816061-45829712 Eucalyptus grandis
Eucgr.F03434 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45816061-45826060 Eucalyptus grandis
Eucgr.F03434 10.0kb downstream 10.0kb downstream 13652 true Chr06: 45826061-45839712 Eucalyptus grandis
Eucgr.F03434 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45829713-45839712 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3286 0.0 28.3005    
cufflinks 15.506 0.0 42.7882   High
cufflinks 13.9 0.0 33.3889    
cufflinks 10.4642 0.0 27.683    
cufflinks 9.74776 0.0 23.6908   Low
cufflinks 14.3756 0.0 39.3392    

0 Strain