Gene : Eucgr.F02852 E. grandis v2.0
Defline:  (1 of 1) PTHR12135 - DNA REPAIR PROTEIN XP-C / RAD4 Genomic Order:  2512
Name:  ? Eucgr.F02852 Secondary Identifier:  ? PAC:32054552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02852 0.5kb upstream 0.5kb upstream 5651 true Chr06: 40707300-40712950 Eucalyptus grandis
Eucgr.F02852 0.5kb upstream 0.5kb upstream 500 false Chr06: 40712451-40712950 Eucalyptus grandis
Eucgr.F02852 0.5kb downstream 0.5kb downstream 5651 true Chr06: 40706800-40712450 Eucalyptus grandis
Eucgr.F02852 0.5kb downstream 0.5kb downstream 500 false Chr06: 40706800-40707299 Eucalyptus grandis
Eucgr.F02852 1.0kb upstream 1.0kb upstream 6151 true Chr06: 40707300-40713450 Eucalyptus grandis
Eucgr.F02852 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40712451-40713450 Eucalyptus grandis
Eucgr.F02852 1.0kb downstream 1.0kb downstream 6151 true Chr06: 40706300-40712450 Eucalyptus grandis
Eucgr.F02852 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40706300-40707299 Eucalyptus grandis
Eucgr.F02852 2.0kb upstream 2.0kb upstream 7151 true Chr06: 40707300-40714450 Eucalyptus grandis
Eucgr.F02852 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40712451-40714450 Eucalyptus grandis
Eucgr.F02852 2.0kb downstream 2.0kb downstream 7151 true Chr06: 40705300-40712450 Eucalyptus grandis
Eucgr.F02852 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40705300-40707299 Eucalyptus grandis
Eucgr.F02852 5.0kb upstream 5.0kb upstream 10151 true Chr06: 40707300-40717450 Eucalyptus grandis
Eucgr.F02852 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40712451-40717450 Eucalyptus grandis
Eucgr.F02852 5.0kb downstream 5.0kb downstream 10151 true Chr06: 40702300-40712450 Eucalyptus grandis
Eucgr.F02852 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40702300-40707299 Eucalyptus grandis
Eucgr.F02852 10.0kb upstream 10.0kb upstream 15151 true Chr06: 40707300-40722450 Eucalyptus grandis
Eucgr.F02852 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40712451-40722450 Eucalyptus grandis
Eucgr.F02852 10.0kb downstream 10.0kb downstream 15151 true Chr06: 40697300-40712450 Eucalyptus grandis
Eucgr.F02852 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40697300-40707299 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0994 0.0 5.60526    
cufflinks 2.96507 0.0 7.47856    
cufflinks 3.05823 0.0 7.67912    
cufflinks 2.22801 0.0 5.82316    
cufflinks 5.0652 0.0 11.9015    
cufflinks 0.277171 0.0 1.07862 Low Low

0 Strain