Gene : Eucgr.F02289 E. grandis v2.0
Defline:  (1 of 31) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Genomic Order:  1904
Name:  ? Eucgr.F02289 Secondary Identifier:  ? PAC:32057453
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02289 0.5kb upstream 0.5kb upstream 2886 true Chr06: 32156447-32159332 Eucalyptus grandis
Eucgr.F02289 0.5kb upstream 0.5kb upstream 500 false Chr06: 32158833-32159332 Eucalyptus grandis
Eucgr.F02289 0.5kb downstream 0.5kb downstream 2886 true Chr06: 32155947-32158832 Eucalyptus grandis
Eucgr.F02289 0.5kb downstream 0.5kb downstream 500 false Chr06: 32155947-32156446 Eucalyptus grandis
Eucgr.F02289 1.0kb upstream 1.0kb upstream 3386 true Chr06: 32156447-32159832 Eucalyptus grandis
Eucgr.F02289 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32158833-32159832 Eucalyptus grandis
Eucgr.F02289 1.0kb downstream 1.0kb downstream 3386 true Chr06: 32155447-32158832 Eucalyptus grandis
Eucgr.F02289 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32155447-32156446 Eucalyptus grandis
Eucgr.F02289 2.0kb upstream 2.0kb upstream 4386 true Chr06: 32156447-32160832 Eucalyptus grandis
Eucgr.F02289 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32158833-32160832 Eucalyptus grandis
Eucgr.F02289 2.0kb downstream 2.0kb downstream 4386 true Chr06: 32154447-32158832 Eucalyptus grandis
Eucgr.F02289 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32154447-32156446 Eucalyptus grandis
Eucgr.F02289 5.0kb upstream 5.0kb upstream 7386 true Chr06: 32156447-32163832 Eucalyptus grandis
Eucgr.F02289 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32158833-32163832 Eucalyptus grandis
Eucgr.F02289 5.0kb downstream 5.0kb downstream 7386 true Chr06: 32151447-32158832 Eucalyptus grandis
Eucgr.F02289 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32151447-32156446 Eucalyptus grandis
Eucgr.F02289 10.0kb upstream 10.0kb upstream 12386 true Chr06: 32156447-32168832 Eucalyptus grandis
Eucgr.F02289 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32158833-32168832 Eucalyptus grandis
Eucgr.F02289 10.0kb downstream 10.0kb downstream 12386 true Chr06: 32146447-32158832 Eucalyptus grandis
Eucgr.F02289 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32146447-32156446 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
124071977 5270 Rosid View MSA
123751371 5271 Pentapetalae View MSA
122773994 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0610851 0.0 0.246692 Low  
cufflinks 0.212129 0.0 0.705 Low  
cufflinks 0.234142 0.0 0.770883 Low  
cufflinks 0.0864112 0.0 0.32433 Low  
cufflinks 0.0479876 0.0 0.210181 Low  
cufflinks 3.43882 0.0 8.49065   High

0 Strain