Gene : Eucgr.F02677 E. grandis v2.0
Defline:  (1 of 2) PTHR24031:SF247 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 Genomic Order:  2349
Name:  ? Eucgr.F02677 Secondary Identifier:  ? PAC:32053505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02677 0.5kb upstream 0.5kb upstream 3144 true Chr06: 38908772-38911915 Eucalyptus grandis
Eucgr.F02677 0.5kb upstream 0.5kb upstream 500 false Chr06: 38908772-38909271 Eucalyptus grandis
Eucgr.F02677 0.5kb downstream 0.5kb downstream 3144 true Chr06: 38909272-38912415 Eucalyptus grandis
Eucgr.F02677 0.5kb downstream 0.5kb downstream 500 false Chr06: 38911916-38912415 Eucalyptus grandis
Eucgr.F02677 1.0kb upstream 1.0kb upstream 3644 true Chr06: 38908272-38911915 Eucalyptus grandis
Eucgr.F02677 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38908272-38909271 Eucalyptus grandis
Eucgr.F02677 1.0kb downstream 1.0kb downstream 3644 true Chr06: 38909272-38912915 Eucalyptus grandis
Eucgr.F02677 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38911916-38912915 Eucalyptus grandis
Eucgr.F02677 2.0kb upstream 2.0kb upstream 4644 true Chr06: 38907272-38911915 Eucalyptus grandis
Eucgr.F02677 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38907272-38909271 Eucalyptus grandis
Eucgr.F02677 2.0kb downstream 2.0kb downstream 4644 true Chr06: 38909272-38913915 Eucalyptus grandis
Eucgr.F02677 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38911916-38913915 Eucalyptus grandis
Eucgr.F02677 5.0kb upstream 5.0kb upstream 7644 true Chr06: 38904272-38911915 Eucalyptus grandis
Eucgr.F02677 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38904272-38909271 Eucalyptus grandis
Eucgr.F02677 5.0kb downstream 5.0kb downstream 7644 true Chr06: 38909272-38916915 Eucalyptus grandis
Eucgr.F02677 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38911916-38916915 Eucalyptus grandis
Eucgr.F02677 10.0kb upstream 10.0kb upstream 12644 true Chr06: 38899272-38911915 Eucalyptus grandis
Eucgr.F02677 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38899272-38909271 Eucalyptus grandis
Eucgr.F02677 10.0kb downstream 10.0kb downstream 12644 true Chr06: 38909272-38921915 Eucalyptus grandis
Eucgr.F02677 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38911916-38921915 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665472 5273 Angiosperm View MSA
124050674 5270 Rosid View MSA
123619855 5271 Pentapetalae View MSA
122654286 5272 Eudicot View MSA
120937438 5274 Embryophyte View MSA
122977924 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3803 0.0 6.7785    
cufflinks 0.492396 0.0 1.82747 Low Low
cufflinks 4.17486 0.0 11.1429   High
cufflinks 1.36973 0.0 4.37725    
cufflinks 2.05382 0.0 5.92889    
cufflinks 0.475243 0.0 1.84953 Low Low

0 Strain