Gene : Eucgr.F02051 E. grandis v2.0
Defline:  (1 of 2) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  1693
Name:  ? Eucgr.F02051 Secondary Identifier:  ? PAC:32054203
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02051 0.5kb upstream 0.5kb upstream 1427 true Chr06: 27056532-27057958 Eucalyptus grandis
Eucgr.F02051 0.5kb upstream 0.5kb upstream 500 false Chr06: 27057459-27057958 Eucalyptus grandis
Eucgr.F02051 0.5kb downstream 0.5kb downstream 1427 true Chr06: 27056032-27057458 Eucalyptus grandis
Eucgr.F02051 0.5kb downstream 0.5kb downstream 500 false Chr06: 27056032-27056531 Eucalyptus grandis
Eucgr.F02051 1.0kb upstream 1.0kb upstream 1927 true Chr06: 27056532-27058458 Eucalyptus grandis
Eucgr.F02051 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27057459-27058458 Eucalyptus grandis
Eucgr.F02051 1.0kb downstream 1.0kb downstream 1927 true Chr06: 27055532-27057458 Eucalyptus grandis
Eucgr.F02051 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27055532-27056531 Eucalyptus grandis
Eucgr.F02051 2.0kb upstream 2.0kb upstream 2927 true Chr06: 27056532-27059458 Eucalyptus grandis
Eucgr.F02051 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27057459-27059458 Eucalyptus grandis
Eucgr.F02051 2.0kb downstream 2.0kb downstream 2927 true Chr06: 27054532-27057458 Eucalyptus grandis
Eucgr.F02051 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27054532-27056531 Eucalyptus grandis
Eucgr.F02051 5.0kb upstream 5.0kb upstream 5927 true Chr06: 27056532-27062458 Eucalyptus grandis
Eucgr.F02051 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27057459-27062458 Eucalyptus grandis
Eucgr.F02051 5.0kb downstream 5.0kb downstream 5927 true Chr06: 27051532-27057458 Eucalyptus grandis
Eucgr.F02051 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27051532-27056531 Eucalyptus grandis
Eucgr.F02051 10.0kb upstream 10.0kb upstream 10927 true Chr06: 27056532-27067458 Eucalyptus grandis
Eucgr.F02051 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27057459-27067458 Eucalyptus grandis
Eucgr.F02051 10.0kb downstream 10.0kb downstream 10927 true Chr06: 27046532-27057458 Eucalyptus grandis
Eucgr.F02051 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27046532-27056531 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063248 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1393 0.0 28.9246   High
cufflinks 4.824 0.0 12.7468    
cufflinks 4.55163 0.0 12.0717    
cufflinks 1.001 0.0 3.13672    
cufflinks 0.541291 0.0 1.83247 Low Low
cufflinks 10.6729 0.0 25.5572    

0 Strain