Gene : Eucgr.F00722 E. grandis v2.0
Defline:  (1 of 1) KOG3036 - Protein involved in cell differentiation/sexual development Genomic Order:  685
Name:  ? Eucgr.F00722 Secondary Identifier:  ? PAC:32055149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00722 0.5kb upstream 0.5kb upstream 6103 true Chr06: 10388362-10394464 Eucalyptus grandis
Eucgr.F00722 0.5kb upstream 0.5kb upstream 500 false Chr06: 10393965-10394464 Eucalyptus grandis
Eucgr.F00722 0.5kb downstream 0.5kb downstream 6103 true Chr06: 10387862-10393964 Eucalyptus grandis
Eucgr.F00722 0.5kb downstream 0.5kb downstream 500 false Chr06: 10387862-10388361 Eucalyptus grandis
Eucgr.F00722 1.0kb upstream 1.0kb upstream 6603 true Chr06: 10388362-10394964 Eucalyptus grandis
Eucgr.F00722 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10393965-10394964 Eucalyptus grandis
Eucgr.F00722 1.0kb downstream 1.0kb downstream 6603 true Chr06: 10387362-10393964 Eucalyptus grandis
Eucgr.F00722 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10387362-10388361 Eucalyptus grandis
Eucgr.F00722 2.0kb upstream 2.0kb upstream 7603 true Chr06: 10388362-10395964 Eucalyptus grandis
Eucgr.F00722 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10393965-10395964 Eucalyptus grandis
Eucgr.F00722 2.0kb downstream 2.0kb downstream 7603 true Chr06: 10386362-10393964 Eucalyptus grandis
Eucgr.F00722 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10386362-10388361 Eucalyptus grandis
Eucgr.F00722 5.0kb upstream 5.0kb upstream 10603 true Chr06: 10388362-10398964 Eucalyptus grandis
Eucgr.F00722 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10393965-10398964 Eucalyptus grandis
Eucgr.F00722 5.0kb downstream 5.0kb downstream 10603 true Chr06: 10383362-10393964 Eucalyptus grandis
Eucgr.F00722 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10383362-10388361 Eucalyptus grandis
Eucgr.F00722 10.0kb upstream 10.0kb upstream 15603 true Chr06: 10388362-10403964 Eucalyptus grandis
Eucgr.F00722 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10393965-10403964 Eucalyptus grandis
Eucgr.F00722 10.0kb downstream 10.0kb downstream 15603 true Chr06: 10378362-10393964 Eucalyptus grandis
Eucgr.F00722 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10378362-10388361 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066186 5270 Rosid View MSA
123748122 5271 Pentapetalae View MSA
122792853 5272 Eudicot View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7419 0.0 45.0849    
cufflinks 19.0675 0.0 47.9544    
cufflinks 18.6485 0.0 42.6376   Low
cufflinks 19.956 0.0 44.9263    
cufflinks 19.4182 0.0 44.0032    
cufflinks 21.5144 0.0 48.5819   High

0 Strain