Gene : Eucgr.E01134 E. grandis v2.0
Defline:  (1 of 1) PTHR10108:SF801 - METHYLTRANSFERASE PMT18-RELATED Genomic Order:  889
Name:  ? Eucgr.E01134 Secondary Identifier:  ? PAC:32029060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01134 0.5kb upstream 0.5kb upstream 4855 true Chr05: 11006700-11011554 Eucalyptus grandis
Eucgr.E01134 0.5kb upstream 0.5kb upstream 500 false Chr05: 11011055-11011554 Eucalyptus grandis
Eucgr.E01134 0.5kb downstream 0.5kb downstream 4855 true Chr05: 11006200-11011054 Eucalyptus grandis
Eucgr.E01134 0.5kb downstream 0.5kb downstream 500 false Chr05: 11006200-11006699 Eucalyptus grandis
Eucgr.E01134 1.0kb upstream 1.0kb upstream 5355 true Chr05: 11006700-11012054 Eucalyptus grandis
Eucgr.E01134 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11011055-11012054 Eucalyptus grandis
Eucgr.E01134 1.0kb downstream 1.0kb downstream 5355 true Chr05: 11005700-11011054 Eucalyptus grandis
Eucgr.E01134 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11005700-11006699 Eucalyptus grandis
Eucgr.E01134 2.0kb upstream 2.0kb upstream 6355 true Chr05: 11006700-11013054 Eucalyptus grandis
Eucgr.E01134 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11011055-11013054 Eucalyptus grandis
Eucgr.E01134 2.0kb downstream 2.0kb downstream 6355 true Chr05: 11004700-11011054 Eucalyptus grandis
Eucgr.E01134 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11004700-11006699 Eucalyptus grandis
Eucgr.E01134 5.0kb upstream 5.0kb upstream 9355 true Chr05: 11006700-11016054 Eucalyptus grandis
Eucgr.E01134 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11011055-11016054 Eucalyptus grandis
Eucgr.E01134 5.0kb downstream 5.0kb downstream 9355 true Chr05: 11001700-11011054 Eucalyptus grandis
Eucgr.E01134 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11001700-11006699 Eucalyptus grandis
Eucgr.E01134 10.0kb upstream 10.0kb upstream 14355 true Chr05: 11006700-11021054 Eucalyptus grandis
Eucgr.E01134 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11011055-11021054 Eucalyptus grandis
Eucgr.E01134 10.0kb downstream 10.0kb downstream 14355 true Chr05: 10996700-11011054 Eucalyptus grandis
Eucgr.E01134 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10996700-11006699 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063763 5270 Rosid View MSA
123736369 5271 Pentapetalae View MSA
122786286 5272 Eudicot View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6416 0.0 43.4449    
cufflinks 5.92121 0.0 13.6129   Low
cufflinks 13.4094 0.0 29.7321    
cufflinks 14.8661 0.0 32.9038    
cufflinks 27.8836 0.0 62.0513   High
cufflinks 17.8566 0.0 39.4893    

0 Strain