Gene : Eucgr.D02344 E. grandis v2.0
Defline:  (1 of 5) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  1943
Name:  ? Eucgr.D02344 Secondary Identifier:  ? PAC:32051862
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02344 0.5kb upstream 0.5kb upstream 2356 true Chr04: 36670786-36673141 Eucalyptus grandis
Eucgr.D02344 0.5kb upstream 0.5kb upstream 500 false Chr04: 36670786-36671285 Eucalyptus grandis
Eucgr.D02344 0.5kb downstream 0.5kb downstream 2356 true Chr04: 36671286-36673641 Eucalyptus grandis
Eucgr.D02344 0.5kb downstream 0.5kb downstream 500 false Chr04: 36673142-36673641 Eucalyptus grandis
Eucgr.D02344 1.0kb upstream 1.0kb upstream 2856 true Chr04: 36670286-36673141 Eucalyptus grandis
Eucgr.D02344 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36670286-36671285 Eucalyptus grandis
Eucgr.D02344 1.0kb downstream 1.0kb downstream 2856 true Chr04: 36671286-36674141 Eucalyptus grandis
Eucgr.D02344 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36673142-36674141 Eucalyptus grandis
Eucgr.D02344 2.0kb upstream 2.0kb upstream 3856 true Chr04: 36669286-36673141 Eucalyptus grandis
Eucgr.D02344 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36669286-36671285 Eucalyptus grandis
Eucgr.D02344 2.0kb downstream 2.0kb downstream 3856 true Chr04: 36671286-36675141 Eucalyptus grandis
Eucgr.D02344 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36673142-36675141 Eucalyptus grandis
Eucgr.D02344 5.0kb upstream 5.0kb upstream 6856 true Chr04: 36666286-36673141 Eucalyptus grandis
Eucgr.D02344 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36666286-36671285 Eucalyptus grandis
Eucgr.D02344 5.0kb downstream 5.0kb downstream 6856 true Chr04: 36671286-36678141 Eucalyptus grandis
Eucgr.D02344 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36673142-36678141 Eucalyptus grandis
Eucgr.D02344 10.0kb upstream 10.0kb upstream 11856 true Chr04: 36661286-36673141 Eucalyptus grandis
Eucgr.D02344 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36661286-36671285 Eucalyptus grandis
Eucgr.D02344 10.0kb downstream 10.0kb downstream 11856 true Chr04: 36671286-36683141 Eucalyptus grandis
Eucgr.D02344 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36673142-36683141 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072043 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.55971 0.0 9.47612    
cufflinks 2.83483 0.0 7.79554    
cufflinks 1.49483 0.0 4.40294    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.586649 0.0 1.8867 Low Low

0 Strain