Gene : Eucgr.D00438 E. grandis v2.0
Defline:  (1 of 2) PF03388 - Legume-like lectin family (Lectin_leg-like) Genomic Order:  355
Name:  ? Eucgr.D00438 Secondary Identifier:  ? PAC:32050524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00438 0.5kb upstream 0.5kb upstream 2997 true Chr04: 8156120-8159116 Eucalyptus grandis
Eucgr.D00438 0.5kb upstream 0.5kb upstream 500 false Chr04: 8156120-8156619 Eucalyptus grandis
Eucgr.D00438 0.5kb downstream 0.5kb downstream 2997 true Chr04: 8156620-8159616 Eucalyptus grandis
Eucgr.D00438 0.5kb downstream 0.5kb downstream 500 false Chr04: 8159117-8159616 Eucalyptus grandis
Eucgr.D00438 1.0kb upstream 1.0kb upstream 3497 true Chr04: 8155620-8159116 Eucalyptus grandis
Eucgr.D00438 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8155620-8156619 Eucalyptus grandis
Eucgr.D00438 1.0kb downstream 1.0kb downstream 3497 true Chr04: 8156620-8160116 Eucalyptus grandis
Eucgr.D00438 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8159117-8160116 Eucalyptus grandis
Eucgr.D00438 2.0kb upstream 2.0kb upstream 4497 true Chr04: 8154620-8159116 Eucalyptus grandis
Eucgr.D00438 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8154620-8156619 Eucalyptus grandis
Eucgr.D00438 2.0kb downstream 2.0kb downstream 4497 true Chr04: 8156620-8161116 Eucalyptus grandis
Eucgr.D00438 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8159117-8161116 Eucalyptus grandis
Eucgr.D00438 5.0kb upstream 5.0kb upstream 7497 true Chr04: 8151620-8159116 Eucalyptus grandis
Eucgr.D00438 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8151620-8156619 Eucalyptus grandis
Eucgr.D00438 5.0kb downstream 5.0kb downstream 7497 true Chr04: 8156620-8164116 Eucalyptus grandis
Eucgr.D00438 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8159117-8164116 Eucalyptus grandis
Eucgr.D00438 10.0kb upstream 10.0kb upstream 12497 true Chr04: 8146620-8159116 Eucalyptus grandis
Eucgr.D00438 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8146620-8156619 Eucalyptus grandis
Eucgr.D00438 10.0kb downstream 10.0kb downstream 12497 true Chr04: 8156620-8169116 Eucalyptus grandis
Eucgr.D00438 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8159117-8169116 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784027 5273 Angiosperm View MSA
124075443 5270 Rosid View MSA
123755864 5271 Pentapetalae View MSA
122777075 5272 Eudicot View MSA
121055462 5274 Embryophyte View MSA
123095394 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115981 0.0 0.433682 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.438581 0.0 1.37045    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.60269 0.0 6.77412   High

0 Strain