Gene : Eucgr.D00588 E. grandis v2.0
Defline:  (1 of 1) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  473
Name:  ? Eucgr.D00588 Secondary Identifier:  ? PAC:32049853
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00588 0.5kb upstream 0.5kb upstream 7214 true Chr04: 11062816-11070029 Eucalyptus grandis
Eucgr.D00588 0.5kb upstream 0.5kb upstream 500 false Chr04: 11062816-11063315 Eucalyptus grandis
Eucgr.D00588 0.5kb downstream 0.5kb downstream 7214 true Chr04: 11063316-11070529 Eucalyptus grandis
Eucgr.D00588 0.5kb downstream 0.5kb downstream 500 false Chr04: 11070030-11070529 Eucalyptus grandis
Eucgr.D00588 1.0kb upstream 1.0kb upstream 7714 true Chr04: 11062316-11070029 Eucalyptus grandis
Eucgr.D00588 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11062316-11063315 Eucalyptus grandis
Eucgr.D00588 1.0kb downstream 1.0kb downstream 7714 true Chr04: 11063316-11071029 Eucalyptus grandis
Eucgr.D00588 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11070030-11071029 Eucalyptus grandis
Eucgr.D00588 2.0kb upstream 2.0kb upstream 8714 true Chr04: 11061316-11070029 Eucalyptus grandis
Eucgr.D00588 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11061316-11063315 Eucalyptus grandis
Eucgr.D00588 2.0kb downstream 2.0kb downstream 8714 true Chr04: 11063316-11072029 Eucalyptus grandis
Eucgr.D00588 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11070030-11072029 Eucalyptus grandis
Eucgr.D00588 5.0kb upstream 5.0kb upstream 11714 true Chr04: 11058316-11070029 Eucalyptus grandis
Eucgr.D00588 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11058316-11063315 Eucalyptus grandis
Eucgr.D00588 5.0kb downstream 5.0kb downstream 11714 true Chr04: 11063316-11075029 Eucalyptus grandis
Eucgr.D00588 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11070030-11075029 Eucalyptus grandis
Eucgr.D00588 10.0kb upstream 10.0kb upstream 16714 true Chr04: 11053316-11070029 Eucalyptus grandis
Eucgr.D00588 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11053316-11063315 Eucalyptus grandis
Eucgr.D00588 10.0kb downstream 10.0kb downstream 16714 true Chr04: 11063316-11080029 Eucalyptus grandis
Eucgr.D00588 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11070030-11080029 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.93288 0.0 14.4652   Low
cufflinks 13.7396 0.0 30.8919   High
cufflinks 6.30933 0.0 16.3319    
cufflinks 9.42103 0.0 21.5078    
cufflinks 13.9505 0.0 31.2843   High
cufflinks 6.69866 0.0 17.665    

0 Strain