Gene : Eucgr.D00248 E. grandis v2.0
Defline:  (1 of 1) KOG4615 - Uncharacterized conserved protein Genomic Order:  190
Name:  ? Eucgr.D00248 Secondary Identifier:  ? PAC:32051266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00248 0.5kb upstream 0.5kb upstream 3927 true Chr04: 4197867-4201793 Eucalyptus grandis
Eucgr.D00248 0.5kb upstream 0.5kb upstream 500 false Chr04: 4201294-4201793 Eucalyptus grandis
Eucgr.D00248 0.5kb downstream 0.5kb downstream 3927 true Chr04: 4197367-4201293 Eucalyptus grandis
Eucgr.D00248 0.5kb downstream 0.5kb downstream 500 false Chr04: 4197367-4197866 Eucalyptus grandis
Eucgr.D00248 1.0kb upstream 1.0kb upstream 4427 true Chr04: 4197867-4202293 Eucalyptus grandis
Eucgr.D00248 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4201294-4202293 Eucalyptus grandis
Eucgr.D00248 1.0kb downstream 1.0kb downstream 4427 true Chr04: 4196867-4201293 Eucalyptus grandis
Eucgr.D00248 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4196867-4197866 Eucalyptus grandis
Eucgr.D00248 2.0kb upstream 2.0kb upstream 5427 true Chr04: 4197867-4203293 Eucalyptus grandis
Eucgr.D00248 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4201294-4203293 Eucalyptus grandis
Eucgr.D00248 2.0kb downstream 2.0kb downstream 5427 true Chr04: 4195867-4201293 Eucalyptus grandis
Eucgr.D00248 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4195867-4197866 Eucalyptus grandis
Eucgr.D00248 5.0kb upstream 5.0kb upstream 8427 true Chr04: 4197867-4206293 Eucalyptus grandis
Eucgr.D00248 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4201294-4206293 Eucalyptus grandis
Eucgr.D00248 5.0kb downstream 5.0kb downstream 8427 true Chr04: 4192867-4201293 Eucalyptus grandis
Eucgr.D00248 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4192867-4197866 Eucalyptus grandis
Eucgr.D00248 10.0kb upstream 10.0kb upstream 13427 true Chr04: 4197867-4211293 Eucalyptus grandis
Eucgr.D00248 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4201294-4211293 Eucalyptus grandis
Eucgr.D00248 10.0kb downstream 10.0kb downstream 13427 true Chr04: 4187867-4201293 Eucalyptus grandis
Eucgr.D00248 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4187867-4197866 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067674 5270 Rosid View MSA
123737337 5271 Pentapetalae View MSA
122792320 5272 Eudicot View MSA
122045575 5273 Angiosperm View MSA
121346105 5274 Embryophyte View MSA
123380331 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.2916 0.0 90.145 High  
cufflinks 51.3429 0.0 117.137 High High
cufflinks 31.3447 0.0 71.7516 High  
cufflinks 48.866 0.0 111.713 High High
cufflinks 27.9973 0.0 64.6354    
cufflinks 25.4465 0.0 66.6534   Low

0 Strain