Gene : Eucgr.C01387 E. grandis v2.0
Defline:  (1 of 1) PTHR12979:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 Genomic Order:  1193
Name:  ? Eucgr.C01387 Secondary Identifier:  ? PAC:32038156
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01387 0.5kb upstream 0.5kb upstream 9768 true Chr03: 24163041-24172808 Eucalyptus grandis
Eucgr.C01387 0.5kb upstream 0.5kb upstream 500 false Chr03: 24163041-24163540 Eucalyptus grandis
Eucgr.C01387 0.5kb downstream 0.5kb downstream 9768 true Chr03: 24163541-24173308 Eucalyptus grandis
Eucgr.C01387 0.5kb downstream 0.5kb downstream 500 false Chr03: 24172809-24173308 Eucalyptus grandis
Eucgr.C01387 1.0kb upstream 1.0kb upstream 10268 true Chr03: 24162541-24172808 Eucalyptus grandis
Eucgr.C01387 1.0kb upstream 1.0kb upstream 1000 false Chr03: 24162541-24163540 Eucalyptus grandis
Eucgr.C01387 1.0kb downstream 1.0kb downstream 10268 true Chr03: 24163541-24173808 Eucalyptus grandis
Eucgr.C01387 1.0kb downstream 1.0kb downstream 1000 false Chr03: 24172809-24173808 Eucalyptus grandis
Eucgr.C01387 2.0kb upstream 2.0kb upstream 11268 true Chr03: 24161541-24172808 Eucalyptus grandis
Eucgr.C01387 2.0kb upstream 2.0kb upstream 2000 false Chr03: 24161541-24163540 Eucalyptus grandis
Eucgr.C01387 2.0kb downstream 2.0kb downstream 11268 true Chr03: 24163541-24174808 Eucalyptus grandis
Eucgr.C01387 2.0kb downstream 2.0kb downstream 2000 false Chr03: 24172809-24174808 Eucalyptus grandis
Eucgr.C01387 5.0kb upstream 5.0kb upstream 14268 true Chr03: 24158541-24172808 Eucalyptus grandis
Eucgr.C01387 5.0kb upstream 5.0kb upstream 5000 false Chr03: 24158541-24163540 Eucalyptus grandis
Eucgr.C01387 5.0kb downstream 5.0kb downstream 14268 true Chr03: 24163541-24177808 Eucalyptus grandis
Eucgr.C01387 5.0kb downstream 5.0kb downstream 5000 false Chr03: 24172809-24177808 Eucalyptus grandis
Eucgr.C01387 10.0kb upstream 10.0kb upstream 19268 true Chr03: 24153541-24172808 Eucalyptus grandis
Eucgr.C01387 10.0kb upstream 10.0kb upstream 10000 false Chr03: 24153541-24163540 Eucalyptus grandis
Eucgr.C01387 10.0kb downstream 10.0kb downstream 19268 true Chr03: 24163541-24182808 Eucalyptus grandis
Eucgr.C01387 10.0kb downstream 10.0kb downstream 10000 false Chr03: 24172809-24182808 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041333 5273 Angiosperm View MSA
124066173 5270 Rosid View MSA
123737593 5271 Pentapetalae View MSA
122791315 5272 Eudicot View MSA
121344566 5274 Embryophyte View MSA
123426128 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4665 0.0 27.6432    
cufflinks 7.03396 0.0 15.8681    
cufflinks 12.6661 0.0 28.0625    
cufflinks 9.47688 0.0 21.1158    
cufflinks 4.44051 0.0 10.3726   Low
cufflinks 10.8939 0.0 24.2552    

0 Strain