Gene : Eucgr.B02225 E. grandis v2.0
Defline:  (1 of 2) PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) Genomic Order:  1746
Name:  ? Eucgr.B02225 Secondary Identifier:  ? PAC:32060629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02225 0.5kb upstream 0.5kb upstream 14002 true Chr02: 41433780-41447781 Eucalyptus grandis
Eucgr.B02225 0.5kb upstream 0.5kb upstream 500 false Chr02: 41447282-41447781 Eucalyptus grandis
Eucgr.B02225 0.5kb downstream 0.5kb downstream 14002 true Chr02: 41433280-41447281 Eucalyptus grandis
Eucgr.B02225 0.5kb downstream 0.5kb downstream 500 false Chr02: 41433280-41433779 Eucalyptus grandis
Eucgr.B02225 1.0kb upstream 1.0kb upstream 14502 true Chr02: 41433780-41448281 Eucalyptus grandis
Eucgr.B02225 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41447282-41448281 Eucalyptus grandis
Eucgr.B02225 1.0kb downstream 1.0kb downstream 14502 true Chr02: 41432780-41447281 Eucalyptus grandis
Eucgr.B02225 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41432780-41433779 Eucalyptus grandis
Eucgr.B02225 2.0kb upstream 2.0kb upstream 15502 true Chr02: 41433780-41449281 Eucalyptus grandis
Eucgr.B02225 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41447282-41449281 Eucalyptus grandis
Eucgr.B02225 2.0kb downstream 2.0kb downstream 15502 true Chr02: 41431780-41447281 Eucalyptus grandis
Eucgr.B02225 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41431780-41433779 Eucalyptus grandis
Eucgr.B02225 5.0kb upstream 5.0kb upstream 18502 true Chr02: 41433780-41452281 Eucalyptus grandis
Eucgr.B02225 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41447282-41452281 Eucalyptus grandis
Eucgr.B02225 5.0kb downstream 5.0kb downstream 18502 true Chr02: 41428780-41447281 Eucalyptus grandis
Eucgr.B02225 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41428780-41433779 Eucalyptus grandis
Eucgr.B02225 10.0kb upstream 10.0kb upstream 23502 true Chr02: 41433780-41457281 Eucalyptus grandis
Eucgr.B02225 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41447282-41457281 Eucalyptus grandis
Eucgr.B02225 10.0kb downstream 10.0kb downstream 23502 true Chr02: 41423780-41447281 Eucalyptus grandis
Eucgr.B02225 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41423780-41433779 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066947 5270 Rosid View MSA
123736688 5271 Pentapetalae View MSA
122788269 5272 Eudicot View MSA
122044844 5273 Angiosperm View MSA
121347973 5274 Embryophyte View MSA
123424737 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4685 0.0 25.4011    
cufflinks 19.3983 0.0 43.0805    
cufflinks 12.5557 0.0 27.7735    
cufflinks 20.7665 0.0 46.2089   High
cufflinks 10.5413 0.0 23.3643   Low
cufflinks 15.9681 0.0 35.3142    

0 Strain