Gene : Eucgr.B00631 E. grandis v2.0
Defline:  (1 of 2) PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Genomic Order:  494
Name:  ? Eucgr.B00631 Secondary Identifier:  ? PAC:32060069
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00631 0.5kb upstream 0.5kb upstream 3899 true Chr02: 6573009-6576907 Eucalyptus grandis
Eucgr.B00631 0.5kb upstream 0.5kb upstream 500 false Chr02: 6576408-6576907 Eucalyptus grandis
Eucgr.B00631 0.5kb downstream 0.5kb downstream 3899 true Chr02: 6572509-6576407 Eucalyptus grandis
Eucgr.B00631 0.5kb downstream 0.5kb downstream 500 false Chr02: 6572509-6573008 Eucalyptus grandis
Eucgr.B00631 1.0kb upstream 1.0kb upstream 4399 true Chr02: 6573009-6577407 Eucalyptus grandis
Eucgr.B00631 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6576408-6577407 Eucalyptus grandis
Eucgr.B00631 1.0kb downstream 1.0kb downstream 4399 true Chr02: 6572009-6576407 Eucalyptus grandis
Eucgr.B00631 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6572009-6573008 Eucalyptus grandis
Eucgr.B00631 2.0kb upstream 2.0kb upstream 5399 true Chr02: 6573009-6578407 Eucalyptus grandis
Eucgr.B00631 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6576408-6578407 Eucalyptus grandis
Eucgr.B00631 2.0kb downstream 2.0kb downstream 5399 true Chr02: 6571009-6576407 Eucalyptus grandis
Eucgr.B00631 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6571009-6573008 Eucalyptus grandis
Eucgr.B00631 5.0kb upstream 5.0kb upstream 8399 true Chr02: 6573009-6581407 Eucalyptus grandis
Eucgr.B00631 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6576408-6581407 Eucalyptus grandis
Eucgr.B00631 5.0kb downstream 5.0kb downstream 8399 true Chr02: 6568009-6576407 Eucalyptus grandis
Eucgr.B00631 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6568009-6573008 Eucalyptus grandis
Eucgr.B00631 10.0kb upstream 10.0kb upstream 13399 true Chr02: 6573009-6586407 Eucalyptus grandis
Eucgr.B00631 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6576408-6586407 Eucalyptus grandis
Eucgr.B00631 10.0kb downstream 10.0kb downstream 13399 true Chr02: 6563009-6576407 Eucalyptus grandis
Eucgr.B00631 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6563009-6573008 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069639 5270 Rosid View MSA
123751370 5271 Pentapetalae View MSA
122794305 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37981 0.0 6.26733    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.3577 0.0 8.55832    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain