Gene : Eucgr.A02337 E. grandis v2.0
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  2094
Name:  ? Eucgr.A02337 Secondary Identifier:  ? PAC:32047557
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02337 0.5kb upstream 0.5kb upstream 6251 true Chr01: 38817812-38824062 Eucalyptus grandis
Eucgr.A02337 0.5kb upstream 0.5kb upstream 500 false Chr01: 38823563-38824062 Eucalyptus grandis
Eucgr.A02337 0.5kb downstream 0.5kb downstream 6251 true Chr01: 38817312-38823562 Eucalyptus grandis
Eucgr.A02337 0.5kb downstream 0.5kb downstream 500 false Chr01: 38817312-38817811 Eucalyptus grandis
Eucgr.A02337 1.0kb upstream 1.0kb upstream 6751 true Chr01: 38817812-38824562 Eucalyptus grandis
Eucgr.A02337 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38823563-38824562 Eucalyptus grandis
Eucgr.A02337 1.0kb downstream 1.0kb downstream 6751 true Chr01: 38816812-38823562 Eucalyptus grandis
Eucgr.A02337 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38816812-38817811 Eucalyptus grandis
Eucgr.A02337 2.0kb upstream 2.0kb upstream 7751 true Chr01: 38817812-38825562 Eucalyptus grandis
Eucgr.A02337 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38823563-38825562 Eucalyptus grandis
Eucgr.A02337 2.0kb downstream 2.0kb downstream 7751 true Chr01: 38815812-38823562 Eucalyptus grandis
Eucgr.A02337 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38815812-38817811 Eucalyptus grandis
Eucgr.A02337 5.0kb upstream 5.0kb upstream 10751 true Chr01: 38817812-38828562 Eucalyptus grandis
Eucgr.A02337 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38823563-38828562 Eucalyptus grandis
Eucgr.A02337 5.0kb downstream 5.0kb downstream 10751 true Chr01: 38812812-38823562 Eucalyptus grandis
Eucgr.A02337 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38812812-38817811 Eucalyptus grandis
Eucgr.A02337 10.0kb upstream 10.0kb upstream 15751 true Chr01: 38817812-38833562 Eucalyptus grandis
Eucgr.A02337 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38823563-38833562 Eucalyptus grandis
Eucgr.A02337 10.0kb downstream 10.0kb downstream 15751 true Chr01: 38807812-38823562 Eucalyptus grandis
Eucgr.A02337 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38807812-38817811 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063608 5270 Rosid View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.73549 0.0 22.276    
cufflinks 2.35234 0.0 6.12417    
cufflinks 6.49084 0.0 15.2921    
cufflinks 1.48864 0.0 4.0346   Low
cufflinks 1.60806 0.0 4.34272    
cufflinks 18.6133 0.0 41.3546   High

0 Strain