Gene : Eucgr.A01196 E. grandis v2.0
Defline:  (1 of 1) PTHR22957:SF328 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  1060
Name:  ? Eucgr.A01196 Secondary Identifier:  ? PAC:32046358
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01196 0.5kb upstream 0.5kb upstream 16459 true Chr01: 24091720-24108178 Eucalyptus grandis
Eucgr.A01196 0.5kb upstream 0.5kb upstream 500 false Chr01: 24091720-24092219 Eucalyptus grandis
Eucgr.A01196 0.5kb downstream 0.5kb downstream 16459 true Chr01: 24092220-24108678 Eucalyptus grandis
Eucgr.A01196 0.5kb downstream 0.5kb downstream 500 false Chr01: 24108179-24108678 Eucalyptus grandis
Eucgr.A01196 1.0kb upstream 1.0kb upstream 16959 true Chr01: 24091220-24108178 Eucalyptus grandis
Eucgr.A01196 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24091220-24092219 Eucalyptus grandis
Eucgr.A01196 1.0kb downstream 1.0kb downstream 16959 true Chr01: 24092220-24109178 Eucalyptus grandis
Eucgr.A01196 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24108179-24109178 Eucalyptus grandis
Eucgr.A01196 2.0kb upstream 2.0kb upstream 17959 true Chr01: 24090220-24108178 Eucalyptus grandis
Eucgr.A01196 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24090220-24092219 Eucalyptus grandis
Eucgr.A01196 2.0kb downstream 2.0kb downstream 17959 true Chr01: 24092220-24110178 Eucalyptus grandis
Eucgr.A01196 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24108179-24110178 Eucalyptus grandis
Eucgr.A01196 5.0kb upstream 5.0kb upstream 20959 true Chr01: 24087220-24108178 Eucalyptus grandis
Eucgr.A01196 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24087220-24092219 Eucalyptus grandis
Eucgr.A01196 5.0kb downstream 5.0kb downstream 20959 true Chr01: 24092220-24113178 Eucalyptus grandis
Eucgr.A01196 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24108179-24113178 Eucalyptus grandis
Eucgr.A01196 10.0kb upstream 10.0kb upstream 25959 true Chr01: 24082220-24108178 Eucalyptus grandis
Eucgr.A01196 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24082220-24092219 Eucalyptus grandis
Eucgr.A01196 10.0kb downstream 10.0kb downstream 25959 true Chr01: 24092220-24118178 Eucalyptus grandis
Eucgr.A01196 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24108179-24118178 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069487 5270 Rosid View MSA
123745324 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37503 0.0 10.233   Low
cufflinks 8.46971 0.0 18.9475    
cufflinks 5.31181 0.0 12.1908    
cufflinks 11.5706 0.0 25.6373   High
cufflinks 5.01827 0.0 11.5822    
cufflinks 8.89379 0.0 19.9288    

0 Strain