Gene : AT1G54320 A. thaliana

Defline:  LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Name:  ? AT1G54320
Secondary Identifier:  ? PAC:19656376

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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G54320 5.0kb upstream 5.0kb upstream 7424   true Chr1: 20275534-20282957 Arabidopsis thaliana
AT1G54320 5.0kb upstream 5.0kb upstream 5000   false Chr1: 20277958-20282957 Arabidopsis thaliana
AT1G54320 5.0kb downstream 5.0kb downstream 7424   true Chr1: 20270534-20277957 Arabidopsis thaliana
AT1G54320 5.0kb downstream 5.0kb downstream 5000   false Chr1: 20270534-20275533 Arabidopsis thaliana

345 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
AT1G54320 C. sinensis orange1.1g018560m.g
AT1G54320 A. thaliana AT1G79450
AT1G54320 A. thaliana AT3G12740
AT1G54320 C. papaya evm.TU.supercontig_32.90
AT1G54320 A. thaliana AT3G12740
AT1G54320 R. communis 30125.t000018
AT1G54320 A. thaliana AT3G12740
AT1G54320 A. thaliana Cucsa.118580
AT1G54320 C. sativus AT3G12740
AT1G54320 V. vinifera GSVIVG01036722001
AT1G54320 A. thaliana AT3G12740
AT1G54320 E. salsugineum Thhalv10011617m.g
AT1G54320 C. clementina Ciclev10005291m.g
AT1G54320 A. thaliana AT1G79450
AT1G54320 A. thaliana AT3G12740
AT1G54320 C. rubella Carubv10009602m.g
AT1G54320 A. thaliana MDP0000213757
AT1G54320 M. domestica AT1G79450
AT1G54320 M. domestica AT3G12740
AT1G54320 L. usitatissimum Lus10001834.g
AT1G54320 L. usitatissimum Lus10001762.g
AT1G54320 A. thaliana AT1G79450
AT1G54320 A. thaliana AT3G12740
AT1G54320 P. trichocarpa Potri.010G173900
AT1G54320 P. trichocarpa Potri.008G082100
AT1G54320 A. thaliana AT1G79450
AT1G54320 A. thaliana AT3G12740
AT1G54320 G. raimondii Gorai.009G303800
AT1G54320 A. thaliana AT3G12740
AT1G54320 F. vesca gene19707-v1.0-hybrid

6 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   1503.143 OK     24.19   Low  
  cufflinks   1660.915 OK   High 38.871      
  cufflinks   1712.793 OK   High 32.035      
  cufflinks   1775.827 OK   High 28.948      
  cufflinks   1780.894 OK   High 43.568      
  cufflinks   1946.992 OK   High 45.07   High