Gene : orange1.1g027501m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12465 - UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 Genomic Order:  3
Name:  ? orange1.1g027501m.g Secondary Identifier:  ? PAC:18129023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027501m.g 0.5kb upstream 0.5kb upstream 2496 true scaffold00130: 77270-79765 Citrus sinensis
orange1.1g027501m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00130: 79266-79765 Citrus sinensis
orange1.1g027501m.g 0.5kb downstream 0.5kb downstream 2496 true scaffold00130: 76770-79265 Citrus sinensis
orange1.1g027501m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00130: 76770-77269 Citrus sinensis
orange1.1g027501m.g 1.0kb upstream 1.0kb upstream 2996 true scaffold00130: 77270-80265 Citrus sinensis
orange1.1g027501m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00130: 79266-80265 Citrus sinensis
orange1.1g027501m.g 1.0kb downstream 1.0kb downstream 2996 true scaffold00130: 76270-79265 Citrus sinensis
orange1.1g027501m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00130: 76270-77269 Citrus sinensis
orange1.1g027501m.g 2.0kb upstream 2.0kb upstream 3996 true scaffold00130: 77270-81265 Citrus sinensis
orange1.1g027501m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00130: 79266-81265 Citrus sinensis
orange1.1g027501m.g 2.0kb downstream 2.0kb downstream 3996 true scaffold00130: 75270-79265 Citrus sinensis
orange1.1g027501m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00130: 75270-77269 Citrus sinensis
orange1.1g027501m.g 5.0kb upstream 5.0kb upstream 6996 true scaffold00130: 77270-84265 Citrus sinensis
orange1.1g027501m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00130: 79266-84265 Citrus sinensis
orange1.1g027501m.g 5.0kb downstream 5.0kb downstream 6996 true scaffold00130: 72270-79265 Citrus sinensis
orange1.1g027501m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00130: 72270-77269 Citrus sinensis
orange1.1g027501m.g 10.0kb upstream 10.0kb upstream 11996 true scaffold00130: 77270-89265 Citrus sinensis
orange1.1g027501m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00130: 79266-89265 Citrus sinensis
orange1.1g027501m.g 10.0kb downstream 10.0kb downstream 11996 true scaffold00130: 67270-79265 Citrus sinensis
orange1.1g027501m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00130: 67270-77269 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346167 5266 SBM View MSA
124240351 5268 Malvidae View MSA
124065532 5270 Rosid View MSA
123751005 5271 Pentapetalae View MSA
122787196 5272 Eudicot View MSA
122044837 5273 Angiosperm View MSA
121344965 5274 Embryophyte View MSA
123425589 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain