Gene : orange1.1g012689m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR31642:SF40 - DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  6
Name:  ? orange1.1g012689m.g Secondary Identifier:  ? PAC:18098027
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7120 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012689m.g 0.5kb upstream 0.5kb upstream 3309 true scaffold00393: 134315-137623 Citrus sinensis
orange1.1g012689m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00393: 134315-134814 Citrus sinensis
orange1.1g012689m.g 0.5kb downstream 0.5kb downstream 3309 true scaffold00393: 134815-138123 Citrus sinensis
orange1.1g012689m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00393: 137624-138123 Citrus sinensis
orange1.1g012689m.g 1.0kb upstream 1.0kb upstream 3809 true scaffold00393: 133815-137623 Citrus sinensis
orange1.1g012689m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00393: 133815-134814 Citrus sinensis
orange1.1g012689m.g 1.0kb downstream 1.0kb downstream 3809 true scaffold00393: 134815-138623 Citrus sinensis
orange1.1g012689m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00393: 137624-138623 Citrus sinensis
orange1.1g012689m.g 2.0kb upstream 2.0kb upstream 4809 true scaffold00393: 132815-137623 Citrus sinensis
orange1.1g012689m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00393: 132815-134814 Citrus sinensis
orange1.1g012689m.g 2.0kb downstream 2.0kb downstream 4809 true scaffold00393: 134815-139623 Citrus sinensis
orange1.1g012689m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00393: 137624-139623 Citrus sinensis
orange1.1g012689m.g 5.0kb upstream 5.0kb upstream 7809 true scaffold00393: 129815-137623 Citrus sinensis
orange1.1g012689m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00393: 129815-134814 Citrus sinensis
orange1.1g012689m.g 5.0kb downstream 5.0kb downstream 7809 true scaffold00393: 134815-142623 Citrus sinensis
orange1.1g012689m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00393: 137624-142623 Citrus sinensis
orange1.1g012689m.g 10.0kb upstream 10.0kb upstream 12809 true scaffold00393: 124815-137623 Citrus sinensis
orange1.1g012689m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00393: 124815-134814 Citrus sinensis
orange1.1g012689m.g 10.0kb downstream 10.0kb downstream 12809 true scaffold00393: 134815-147623 Citrus sinensis
orange1.1g012689m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00393: 137624-147623 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345687 5266 SBM View MSA
124243245 5268 Malvidae View MSA
124063642 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain