Gene : orange1.1g007642m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  2
Name:  ? orange1.1g007642m.g Secondary Identifier:  ? PAC:18098020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g007642m.g 0.5kb upstream 0.5kb upstream 13326 true scaffold00393: 69700-83025 Citrus sinensis
orange1.1g007642m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00393: 82526-83025 Citrus sinensis
orange1.1g007642m.g 0.5kb downstream 0.5kb downstream 13326 true scaffold00393: 69200-82525 Citrus sinensis
orange1.1g007642m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00393: 69200-69699 Citrus sinensis
orange1.1g007642m.g 1.0kb upstream 1.0kb upstream 13826 true scaffold00393: 69700-83525 Citrus sinensis
orange1.1g007642m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00393: 82526-83525 Citrus sinensis
orange1.1g007642m.g 1.0kb downstream 1.0kb downstream 13826 true scaffold00393: 68700-82525 Citrus sinensis
orange1.1g007642m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00393: 68700-69699 Citrus sinensis
orange1.1g007642m.g 2.0kb upstream 2.0kb upstream 14826 true scaffold00393: 69700-84525 Citrus sinensis
orange1.1g007642m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00393: 82526-84525 Citrus sinensis
orange1.1g007642m.g 2.0kb downstream 2.0kb downstream 14826 true scaffold00393: 67700-82525 Citrus sinensis
orange1.1g007642m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00393: 67700-69699 Citrus sinensis
orange1.1g007642m.g 5.0kb upstream 5.0kb upstream 17826 true scaffold00393: 69700-87525 Citrus sinensis
orange1.1g007642m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00393: 82526-87525 Citrus sinensis
orange1.1g007642m.g 5.0kb downstream 5.0kb downstream 17826 true scaffold00393: 64700-82525 Citrus sinensis
orange1.1g007642m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00393: 64700-69699 Citrus sinensis
orange1.1g007642m.g 10.0kb upstream 10.0kb upstream 22826 true scaffold00393: 69700-92525 Citrus sinensis
orange1.1g007642m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00393: 82526-92525 Citrus sinensis
orange1.1g007642m.g 10.0kb downstream 10.0kb downstream 22826 true scaffold00393: 59700-82525 Citrus sinensis
orange1.1g007642m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00393: 59700-69699 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530743 5273 Angiosperm Singleton cluster - no MSA
124330352 5266 SBM Singleton cluster - no MSA
124175602 5268 Malvidae Singleton cluster - no MSA
123898136 5270 Rosid Singleton cluster - no MSA
123479993 5271 Pentapetalae Singleton cluster - no MSA
122515245 5272 Eudicot Singleton cluster - no MSA
120803505 5274 Embryophyte Singleton cluster - no MSA
122845059 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain