Gene : orange1.1g020838m.g C. sinensis v1.1
Defline:  (1 of 8) 2.5.1.115 - Homogentisate phytyltransferase / HPT Genomic Order:  1
Name:  ? orange1.1g020838m.g Secondary Identifier:  ? PAC:18110800
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1422 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g020838m.g 0.5kb upstream 0.5kb upstream 11078 true scaffold00475: 1044-12121 Citrus sinensis
orange1.1g020838m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00475: 11622-12121 Citrus sinensis
orange1.1g020838m.g 0.5kb downstream 0.5kb downstream 11078 true scaffold00475: 544-11621 Citrus sinensis
orange1.1g020838m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00475: 544-1043 Citrus sinensis
orange1.1g020838m.g 1.0kb upstream 1.0kb upstream 11578 true scaffold00475: 1044-12621 Citrus sinensis
orange1.1g020838m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00475: 11622-12621 Citrus sinensis
orange1.1g020838m.g 1.0kb downstream 1.0kb downstream 11578 true scaffold00475: 44-11621 Citrus sinensis
orange1.1g020838m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00475: 44-1043 Citrus sinensis
orange1.1g020838m.g 2.0kb upstream 2.0kb upstream 12578 true scaffold00475: 1044-13621 Citrus sinensis
orange1.1g020838m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00475: 11622-13621 Citrus sinensis
orange1.1g020838m.g 2.0kb downstream 2.0kb downstream 11621 true scaffold00475: 1-11621 Citrus sinensis
orange1.1g020838m.g 2.0kb downstream 2.0kb downstream 1043 false scaffold00475: 1-1043 Citrus sinensis
orange1.1g020838m.g 5.0kb upstream 5.0kb upstream 15578 true scaffold00475: 1044-16621 Citrus sinensis
orange1.1g020838m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00475: 11622-16621 Citrus sinensis
orange1.1g020838m.g 5.0kb downstream 5.0kb downstream 11621 true scaffold00475: 1-11621 Citrus sinensis
orange1.1g020838m.g 5.0kb downstream 5.0kb downstream 1043 false scaffold00475: 1-1043 Citrus sinensis
orange1.1g020838m.g 10.0kb upstream 10.0kb upstream 20578 true scaffold00475: 1044-21621 Citrus sinensis
orange1.1g020838m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00475: 11622-21621 Citrus sinensis
orange1.1g020838m.g 10.0kb downstream 10.0kb downstream 11621 true scaffold00475: 1-11621 Citrus sinensis
orange1.1g020838m.g 10.0kb downstream 10.0kb downstream 1043 false scaffold00475: 1-1043 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346176 5266 SBM View MSA
124238838 5268 Malvidae View MSA
124061099 5270 Rosid View MSA
123745017 5271 Pentapetalae View MSA
122786578 5272 Eudicot View MSA
122051505 5273 Angiosperm View MSA
121349227 5274 Embryophyte View MSA
123426888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain