Gene : orange1.1g037091m.g C. sinensis v1.1
Defline:  (1 of 8) 2.5.1.115 - Homogentisate phytyltransferase / HPT Genomic Order:  1
Name:  ? orange1.1g037091m.g Secondary Identifier:  ? PAC:18127063
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1422 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g037091m.g 0.5kb upstream 0.5kb upstream 2802 true scaffold00171: 32313-35114 Citrus sinensis
orange1.1g037091m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00171: 32313-32812 Citrus sinensis
orange1.1g037091m.g 0.5kb downstream 0.5kb downstream 2802 true scaffold00171: 32813-35614 Citrus sinensis
orange1.1g037091m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00171: 35115-35614 Citrus sinensis
orange1.1g037091m.g 1.0kb upstream 1.0kb upstream 3302 true scaffold00171: 31813-35114 Citrus sinensis
orange1.1g037091m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00171: 31813-32812 Citrus sinensis
orange1.1g037091m.g 1.0kb downstream 1.0kb downstream 3302 true scaffold00171: 32813-36114 Citrus sinensis
orange1.1g037091m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00171: 35115-36114 Citrus sinensis
orange1.1g037091m.g 2.0kb upstream 2.0kb upstream 4302 true scaffold00171: 30813-35114 Citrus sinensis
orange1.1g037091m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00171: 30813-32812 Citrus sinensis
orange1.1g037091m.g 2.0kb downstream 2.0kb downstream 4302 true scaffold00171: 32813-37114 Citrus sinensis
orange1.1g037091m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00171: 35115-37114 Citrus sinensis
orange1.1g037091m.g 5.0kb upstream 5.0kb upstream 7302 true scaffold00171: 27813-35114 Citrus sinensis
orange1.1g037091m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00171: 27813-32812 Citrus sinensis
orange1.1g037091m.g 5.0kb downstream 5.0kb downstream 7302 true scaffold00171: 32813-40114 Citrus sinensis
orange1.1g037091m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00171: 35115-40114 Citrus sinensis
orange1.1g037091m.g 10.0kb upstream 10.0kb upstream 12302 true scaffold00171: 22813-35114 Citrus sinensis
orange1.1g037091m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00171: 22813-32812 Citrus sinensis
orange1.1g037091m.g 10.0kb downstream 10.0kb downstream 12302 true scaffold00171: 32813-45114 Citrus sinensis
orange1.1g037091m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00171: 35115-45114 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121533185 5273 Angiosperm View MSA
124332807 5266 SBM View MSA
124178051 5268 Malvidae View MSA
123900582 5270 Rosid View MSA
123482437 5271 Pentapetalae View MSA
122517689 5272 Eudicot View MSA
120805947 5274 Embryophyte View MSA
122847500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain