Gene : orange1.1g022957m.g C. sinensis v1.1
Defline:  (1 of 1) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  4
Name:  ? orange1.1g022957m.g Secondary Identifier:  ? PAC:18094748
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6129 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g022957m.g 0.5kb upstream 0.5kb upstream 4142 true scaffold00351: 36248-40389 Citrus sinensis
orange1.1g022957m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00351: 36248-36747 Citrus sinensis
orange1.1g022957m.g 0.5kb downstream 0.5kb downstream 4142 true scaffold00351: 36748-40889 Citrus sinensis
orange1.1g022957m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00351: 40390-40889 Citrus sinensis
orange1.1g022957m.g 1.0kb upstream 1.0kb upstream 4642 true scaffold00351: 35748-40389 Citrus sinensis
orange1.1g022957m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00351: 35748-36747 Citrus sinensis
orange1.1g022957m.g 1.0kb downstream 1.0kb downstream 4642 true scaffold00351: 36748-41389 Citrus sinensis
orange1.1g022957m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00351: 40390-41389 Citrus sinensis
orange1.1g022957m.g 2.0kb upstream 2.0kb upstream 5642 true scaffold00351: 34748-40389 Citrus sinensis
orange1.1g022957m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00351: 34748-36747 Citrus sinensis
orange1.1g022957m.g 2.0kb downstream 2.0kb downstream 5642 true scaffold00351: 36748-42389 Citrus sinensis
orange1.1g022957m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00351: 40390-42389 Citrus sinensis
orange1.1g022957m.g 5.0kb upstream 5.0kb upstream 8642 true scaffold00351: 31748-40389 Citrus sinensis
orange1.1g022957m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00351: 31748-36747 Citrus sinensis
orange1.1g022957m.g 5.0kb downstream 5.0kb downstream 8642 true scaffold00351: 36748-45389 Citrus sinensis
orange1.1g022957m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00351: 40390-45389 Citrus sinensis
orange1.1g022957m.g 10.0kb upstream 10.0kb upstream 13642 true scaffold00351: 26748-40389 Citrus sinensis
orange1.1g022957m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00351: 26748-36747 Citrus sinensis
orange1.1g022957m.g 10.0kb downstream 10.0kb downstream 13642 true scaffold00351: 36748-50389 Citrus sinensis
orange1.1g022957m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00351: 40390-50389 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342513 5266 SBM View MSA
124238686 5268 Malvidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain