Gene : orange1.1g004262m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  517
Name:  ? orange1.1g004262m.g Secondary Identifier:  ? PAC:18136692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g004262m.g 0.5kb upstream 0.5kb upstream 7600 true scaffold00001: 3455564-3463163 Citrus sinensis
orange1.1g004262m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 3455564-3456063 Citrus sinensis
orange1.1g004262m.g 0.5kb downstream 0.5kb downstream 7600 true scaffold00001: 3456064-3463663 Citrus sinensis
orange1.1g004262m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 3463164-3463663 Citrus sinensis
orange1.1g004262m.g 1.0kb upstream 1.0kb upstream 8100 true scaffold00001: 3455064-3463163 Citrus sinensis
orange1.1g004262m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 3455064-3456063 Citrus sinensis
orange1.1g004262m.g 1.0kb downstream 1.0kb downstream 8100 true scaffold00001: 3456064-3464163 Citrus sinensis
orange1.1g004262m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 3463164-3464163 Citrus sinensis
orange1.1g004262m.g 2.0kb upstream 2.0kb upstream 9100 true scaffold00001: 3454064-3463163 Citrus sinensis
orange1.1g004262m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 3454064-3456063 Citrus sinensis
orange1.1g004262m.g 2.0kb downstream 2.0kb downstream 9100 true scaffold00001: 3456064-3465163 Citrus sinensis
orange1.1g004262m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 3463164-3465163 Citrus sinensis
orange1.1g004262m.g 5.0kb upstream 5.0kb upstream 12100 true scaffold00001: 3451064-3463163 Citrus sinensis
orange1.1g004262m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 3451064-3456063 Citrus sinensis
orange1.1g004262m.g 5.0kb downstream 5.0kb downstream 12100 true scaffold00001: 3456064-3468163 Citrus sinensis
orange1.1g004262m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 3463164-3468163 Citrus sinensis
orange1.1g004262m.g 10.0kb upstream 10.0kb upstream 17100 true scaffold00001: 3446064-3463163 Citrus sinensis
orange1.1g004262m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 3446064-3456063 Citrus sinensis
orange1.1g004262m.g 10.0kb downstream 10.0kb downstream 17100 true scaffold00001: 3456064-3473163 Citrus sinensis
orange1.1g004262m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 3463164-3473163 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain