Gene : orange1.1g012238m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  14
Name:  ? orange1.1g012238m.g Secondary Identifier:  ? PAC:18101339
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis ASPARTATE-DEG1-PWY Citrus sinensis pathologic  
Csinensis ASPARTATESYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  
Csinensis PWY-7115 Citrus sinensis pathologic  
Csinensis PWY-7117 Citrus sinensis pathologic  
Csinensis THRESYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012238m.g 0.5kb upstream 0.5kb upstream 5028 true scaffold00327: 104403-109430 Citrus sinensis
orange1.1g012238m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00327: 108931-109430 Citrus sinensis
orange1.1g012238m.g 0.5kb downstream 0.5kb downstream 5028 true scaffold00327: 103903-108930 Citrus sinensis
orange1.1g012238m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00327: 103903-104402 Citrus sinensis
orange1.1g012238m.g 1.0kb upstream 1.0kb upstream 5528 true scaffold00327: 104403-109930 Citrus sinensis
orange1.1g012238m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00327: 108931-109930 Citrus sinensis
orange1.1g012238m.g 1.0kb downstream 1.0kb downstream 5528 true scaffold00327: 103403-108930 Citrus sinensis
orange1.1g012238m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00327: 103403-104402 Citrus sinensis
orange1.1g012238m.g 2.0kb upstream 2.0kb upstream 6528 true scaffold00327: 104403-110930 Citrus sinensis
orange1.1g012238m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00327: 108931-110930 Citrus sinensis
orange1.1g012238m.g 2.0kb downstream 2.0kb downstream 6528 true scaffold00327: 102403-108930 Citrus sinensis
orange1.1g012238m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00327: 102403-104402 Citrus sinensis
orange1.1g012238m.g 5.0kb upstream 5.0kb upstream 9528 true scaffold00327: 104403-113930 Citrus sinensis
orange1.1g012238m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00327: 108931-113930 Citrus sinensis
orange1.1g012238m.g 5.0kb downstream 5.0kb downstream 9528 true scaffold00327: 99403-108930 Citrus sinensis
orange1.1g012238m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00327: 99403-104402 Citrus sinensis
orange1.1g012238m.g 10.0kb upstream 10.0kb upstream 14528 true scaffold00327: 104403-118930 Citrus sinensis
orange1.1g012238m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00327: 108931-118930 Citrus sinensis
orange1.1g012238m.g 10.0kb downstream 10.0kb downstream 14528 true scaffold00327: 94403-108930 Citrus sinensis
orange1.1g012238m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00327: 94403-104402 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain