Gene : orange1.1g040211m.g C. sinensis v1.1
Defline:  (1 of 6) PTHR13152 - TFIIH, POLYPEPTIDE 4 Genomic Order:  1
Name:  ? orange1.1g040211m.g Secondary Identifier:  ? PAC:18105007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040211m.g 0.5kb upstream 0.5kb upstream 5283 true scaffold00196: 9273-14555 Citrus sinensis
orange1.1g040211m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00196: 14056-14555 Citrus sinensis
orange1.1g040211m.g 0.5kb downstream 0.5kb downstream 5283 true scaffold00196: 8773-14055 Citrus sinensis
orange1.1g040211m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00196: 8773-9272 Citrus sinensis
orange1.1g040211m.g 1.0kb upstream 1.0kb upstream 5783 true scaffold00196: 9273-15055 Citrus sinensis
orange1.1g040211m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00196: 14056-15055 Citrus sinensis
orange1.1g040211m.g 1.0kb downstream 1.0kb downstream 5783 true scaffold00196: 8273-14055 Citrus sinensis
orange1.1g040211m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00196: 8273-9272 Citrus sinensis
orange1.1g040211m.g 2.0kb upstream 2.0kb upstream 6783 true scaffold00196: 9273-16055 Citrus sinensis
orange1.1g040211m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00196: 14056-16055 Citrus sinensis
orange1.1g040211m.g 2.0kb downstream 2.0kb downstream 6783 true scaffold00196: 7273-14055 Citrus sinensis
orange1.1g040211m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00196: 7273-9272 Citrus sinensis
orange1.1g040211m.g 5.0kb upstream 5.0kb upstream 9783 true scaffold00196: 9273-19055 Citrus sinensis
orange1.1g040211m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00196: 14056-19055 Citrus sinensis
orange1.1g040211m.g 5.0kb downstream 5.0kb downstream 9783 true scaffold00196: 4273-14055 Citrus sinensis
orange1.1g040211m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00196: 4273-9272 Citrus sinensis
orange1.1g040211m.g 10.0kb upstream 10.0kb upstream 14783 true scaffold00196: 9273-24055 Citrus sinensis
orange1.1g040211m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00196: 14056-24055 Citrus sinensis
orange1.1g040211m.g 10.0kb downstream 10.0kb downstream 14055 true scaffold00196: 1-14055 Citrus sinensis
orange1.1g040211m.g 10.0kb downstream 10.0kb downstream 9272 false scaffold00196: 1-9272 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530114 5273 Angiosperm Singleton cluster - no MSA
124329715 5266 SBM Singleton cluster - no MSA
124174968 5268 Malvidae Singleton cluster - no MSA
123897503 5270 Rosid Singleton cluster - no MSA
123479362 5271 Pentapetalae Singleton cluster - no MSA
122514614 5272 Eudicot Singleton cluster - no MSA
120802876 5274 Embryophyte Singleton cluster - no MSA
122844430 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain