Gene : orange1.1g043787m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  8
Name:  ? orange1.1g043787m.g Secondary Identifier:  ? PAC:18129163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g043787m.g 0.5kb upstream 0.5kb upstream 5021 true scaffold00236: 32851-37871 Citrus sinensis
orange1.1g043787m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00236: 37372-37871 Citrus sinensis
orange1.1g043787m.g 0.5kb downstream 0.5kb downstream 5021 true scaffold00236: 32351-37371 Citrus sinensis
orange1.1g043787m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00236: 32351-32850 Citrus sinensis
orange1.1g043787m.g 1.0kb upstream 1.0kb upstream 5521 true scaffold00236: 32851-38371 Citrus sinensis
orange1.1g043787m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00236: 37372-38371 Citrus sinensis
orange1.1g043787m.g 1.0kb downstream 1.0kb downstream 5521 true scaffold00236: 31851-37371 Citrus sinensis
orange1.1g043787m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00236: 31851-32850 Citrus sinensis
orange1.1g043787m.g 2.0kb upstream 2.0kb upstream 6521 true scaffold00236: 32851-39371 Citrus sinensis
orange1.1g043787m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00236: 37372-39371 Citrus sinensis
orange1.1g043787m.g 2.0kb downstream 2.0kb downstream 6521 true scaffold00236: 30851-37371 Citrus sinensis
orange1.1g043787m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00236: 30851-32850 Citrus sinensis
orange1.1g043787m.g 5.0kb upstream 5.0kb upstream 9521 true scaffold00236: 32851-42371 Citrus sinensis
orange1.1g043787m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00236: 37372-42371 Citrus sinensis
orange1.1g043787m.g 5.0kb downstream 5.0kb downstream 9521 true scaffold00236: 27851-37371 Citrus sinensis
orange1.1g043787m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00236: 27851-32850 Citrus sinensis
orange1.1g043787m.g 10.0kb upstream 10.0kb upstream 14521 true scaffold00236: 32851-47371 Citrus sinensis
orange1.1g043787m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00236: 37372-47371 Citrus sinensis
orange1.1g043787m.g 10.0kb downstream 10.0kb downstream 14521 true scaffold00236: 22851-37371 Citrus sinensis
orange1.1g043787m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00236: 22851-32850 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350265 5266 SBM View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain