Gene : orange1.1g040142m.g C. sinensis v1.1
Defline:  (1 of 1) PF00458 - WHEP-TRS domain (WHEP-TRS) Genomic Order:  7
Name:  ? orange1.1g040142m.g Secondary Identifier:  ? PAC:18116065
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040142m.g 0.5kb upstream 0.5kb upstream 4962 true scaffold00081: 189849-194810 Citrus sinensis
orange1.1g040142m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00081: 194311-194810 Citrus sinensis
orange1.1g040142m.g 0.5kb downstream 0.5kb downstream 4962 true scaffold00081: 189349-194310 Citrus sinensis
orange1.1g040142m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00081: 189349-189848 Citrus sinensis
orange1.1g040142m.g 1.0kb upstream 1.0kb upstream 5462 true scaffold00081: 189849-195310 Citrus sinensis
orange1.1g040142m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00081: 194311-195310 Citrus sinensis
orange1.1g040142m.g 1.0kb downstream 1.0kb downstream 5462 true scaffold00081: 188849-194310 Citrus sinensis
orange1.1g040142m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00081: 188849-189848 Citrus sinensis
orange1.1g040142m.g 2.0kb upstream 2.0kb upstream 6462 true scaffold00081: 189849-196310 Citrus sinensis
orange1.1g040142m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00081: 194311-196310 Citrus sinensis
orange1.1g040142m.g 2.0kb downstream 2.0kb downstream 6462 true scaffold00081: 187849-194310 Citrus sinensis
orange1.1g040142m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00081: 187849-189848 Citrus sinensis
orange1.1g040142m.g 5.0kb upstream 5.0kb upstream 9462 true scaffold00081: 189849-199310 Citrus sinensis
orange1.1g040142m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00081: 194311-199310 Citrus sinensis
orange1.1g040142m.g 5.0kb downstream 5.0kb downstream 9462 true scaffold00081: 184849-194310 Citrus sinensis
orange1.1g040142m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00081: 184849-189848 Citrus sinensis
orange1.1g040142m.g 10.0kb upstream 10.0kb upstream 14462 true scaffold00081: 189849-204310 Citrus sinensis
orange1.1g040142m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00081: 194311-204310 Citrus sinensis
orange1.1g040142m.g 10.0kb downstream 10.0kb downstream 14462 true scaffold00081: 179849-194310 Citrus sinensis
orange1.1g040142m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00081: 179849-189848 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338437 5266 SBM View MSA
124239100 5268 Malvidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain