Gene : orange1.1g012353m.g C. sinensis v1.1
Defline:  (1 of 2) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  39
Name:  ? orange1.1g012353m.g Secondary Identifier:  ? PAC:18120488
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5910 Citrus sinensis pathologic  
Csinensis PWY-922 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012353m.g 0.5kb upstream 0.5kb upstream 5613 true scaffold00040: 381641-387253 Citrus sinensis
orange1.1g012353m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00040: 381641-382140 Citrus sinensis
orange1.1g012353m.g 0.5kb downstream 0.5kb downstream 5613 true scaffold00040: 382141-387753 Citrus sinensis
orange1.1g012353m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00040: 387254-387753 Citrus sinensis
orange1.1g012353m.g 1.0kb upstream 1.0kb upstream 6113 true scaffold00040: 381141-387253 Citrus sinensis
orange1.1g012353m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00040: 381141-382140 Citrus sinensis
orange1.1g012353m.g 1.0kb downstream 1.0kb downstream 6113 true scaffold00040: 382141-388253 Citrus sinensis
orange1.1g012353m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00040: 387254-388253 Citrus sinensis
orange1.1g012353m.g 2.0kb upstream 2.0kb upstream 7113 true scaffold00040: 380141-387253 Citrus sinensis
orange1.1g012353m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00040: 380141-382140 Citrus sinensis
orange1.1g012353m.g 2.0kb downstream 2.0kb downstream 7113 true scaffold00040: 382141-389253 Citrus sinensis
orange1.1g012353m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00040: 387254-389253 Citrus sinensis
orange1.1g012353m.g 5.0kb upstream 5.0kb upstream 10113 true scaffold00040: 377141-387253 Citrus sinensis
orange1.1g012353m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00040: 377141-382140 Citrus sinensis
orange1.1g012353m.g 5.0kb downstream 5.0kb downstream 10113 true scaffold00040: 382141-392253 Citrus sinensis
orange1.1g012353m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00040: 387254-392253 Citrus sinensis
orange1.1g012353m.g 10.0kb upstream 10.0kb upstream 15113 true scaffold00040: 372141-387253 Citrus sinensis
orange1.1g012353m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00040: 372141-382140 Citrus sinensis
orange1.1g012353m.g 10.0kb downstream 10.0kb downstream 15113 true scaffold00040: 382141-397253 Citrus sinensis
orange1.1g012353m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00040: 387254-397253 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341389 5266 SBM View MSA
124241910 5268 Malvidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain