Gene : orange1.1g001771m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED Genomic Order:  45
Name:  ? orange1.1g001771m.g Secondary Identifier:  ? PAC:18116625
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001771m.g 0.5kb upstream 0.5kb upstream 12026 true scaffold00027: 638484-650509 Citrus sinensis
orange1.1g001771m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00027: 638484-638983 Citrus sinensis
orange1.1g001771m.g 0.5kb downstream 0.5kb downstream 12026 true scaffold00027: 638984-651009 Citrus sinensis
orange1.1g001771m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00027: 650510-651009 Citrus sinensis
orange1.1g001771m.g 1.0kb upstream 1.0kb upstream 12526 true scaffold00027: 637984-650509 Citrus sinensis
orange1.1g001771m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00027: 637984-638983 Citrus sinensis
orange1.1g001771m.g 1.0kb downstream 1.0kb downstream 12526 true scaffold00027: 638984-651509 Citrus sinensis
orange1.1g001771m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00027: 650510-651509 Citrus sinensis
orange1.1g001771m.g 2.0kb upstream 2.0kb upstream 13526 true scaffold00027: 636984-650509 Citrus sinensis
orange1.1g001771m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00027: 636984-638983 Citrus sinensis
orange1.1g001771m.g 2.0kb downstream 2.0kb downstream 13526 true scaffold00027: 638984-652509 Citrus sinensis
orange1.1g001771m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00027: 650510-652509 Citrus sinensis
orange1.1g001771m.g 5.0kb upstream 5.0kb upstream 16526 true scaffold00027: 633984-650509 Citrus sinensis
orange1.1g001771m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00027: 633984-638983 Citrus sinensis
orange1.1g001771m.g 5.0kb downstream 5.0kb downstream 16526 true scaffold00027: 638984-655509 Citrus sinensis
orange1.1g001771m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00027: 650510-655509 Citrus sinensis
orange1.1g001771m.g 10.0kb upstream 10.0kb upstream 21526 true scaffold00027: 628984-650509 Citrus sinensis
orange1.1g001771m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00027: 628984-638983 Citrus sinensis
orange1.1g001771m.g 10.0kb downstream 10.0kb downstream 21526 true scaffold00027: 638984-660509 Citrus sinensis
orange1.1g001771m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00027: 650510-660509 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347665 5266 SBM View MSA
124252285 5268 Malvidae View MSA
124067400 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain