Gene : orange1.1g024671m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR20836:SF0 - 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1
Name:  ? orange1.1g024671m.g Secondary Identifier:  ? PAC:18134868
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5097 Citrus sinensis pathologic  
Csinensis PWY-724 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024671m.g 0.5kb upstream 0.5kb upstream 2872 true scaffold05947: 1-2872 Citrus sinensis
orange1.1g024671m.g 0.5kb upstream 0.5kb upstream 78 false scaffold05947: 1-78 Citrus sinensis
orange1.1g024671m.g 0.5kb downstream 0.5kb downstream 3294 true scaffold05947: 79-3372 Citrus sinensis
orange1.1g024671m.g 0.5kb downstream 0.5kb downstream 500 false scaffold05947: 2873-3372 Citrus sinensis
orange1.1g024671m.g 1.0kb upstream 1.0kb upstream 2872 true scaffold05947: 1-2872 Citrus sinensis
orange1.1g024671m.g 1.0kb upstream 1.0kb upstream 78 false scaffold05947: 1-78 Citrus sinensis
orange1.1g024671m.g 1.0kb downstream 1.0kb downstream 3591 true scaffold05947: 79-3669 Citrus sinensis
orange1.1g024671m.g 1.0kb downstream 1.0kb downstream 797 false scaffold05947: 2873-3669 Citrus sinensis
orange1.1g024671m.g 2.0kb upstream 2.0kb upstream 2872 true scaffold05947: 1-2872 Citrus sinensis
orange1.1g024671m.g 2.0kb upstream 2.0kb upstream 78 false scaffold05947: 1-78 Citrus sinensis
orange1.1g024671m.g 2.0kb downstream 2.0kb downstream 3591 true scaffold05947: 79-3669 Citrus sinensis
orange1.1g024671m.g 2.0kb downstream 2.0kb downstream 797 false scaffold05947: 2873-3669 Citrus sinensis
orange1.1g024671m.g 5.0kb upstream 5.0kb upstream 2872 true scaffold05947: 1-2872 Citrus sinensis
orange1.1g024671m.g 5.0kb upstream 5.0kb upstream 78 false scaffold05947: 1-78 Citrus sinensis
orange1.1g024671m.g 5.0kb downstream 5.0kb downstream 3591 true scaffold05947: 79-3669 Citrus sinensis
orange1.1g024671m.g 5.0kb downstream 5.0kb downstream 797 false scaffold05947: 2873-3669 Citrus sinensis
orange1.1g024671m.g 10.0kb upstream 10.0kb upstream 2872 true scaffold05947: 1-2872 Citrus sinensis
orange1.1g024671m.g 10.0kb upstream 10.0kb upstream 78 false scaffold05947: 1-78 Citrus sinensis
orange1.1g024671m.g 10.0kb downstream 10.0kb downstream 3591 true scaffold05947: 79-3669 Citrus sinensis
orange1.1g024671m.g 10.0kb downstream 10.0kb downstream 797 false scaffold05947: 2873-3669 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339702 5266 SBM View MSA
124251630 5268 Malvidae View MSA
124061007 5270 Rosid View MSA
123740937 5271 Pentapetalae View MSA
122785919 5272 Eudicot View MSA
122046782 5273 Angiosperm View MSA
121345687 5274 Embryophyte View MSA
123424298 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain